RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 PDCD1Q15116 288 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 MIDNQ504T8 468 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 B3GNTL1Q67FW5 361 aaPredicted RBP3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 OTUD7BQ6GQQ9 843 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 CLNKQ7Z7G1 428 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 REPS2Q8NFH8 660 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 SSH3Q8TE77 659 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 SARAFQ96BY9 339 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 PDLIM2Q96JY6 352 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 NEU1Q99519 415 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 INTS13Q9NVM9 706 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 EDARQ9UNE0 448 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 MAPRE3Q9UPY8 281 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 ENTPD2Q9Y5L3 495 aa3.39□□□□□ -1.87
NDUFA4-202ENST00000463308 WIPF3A6NGB9 483 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 MPPED1O15442 326 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 KRT86O43790 486 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 PDE8AO60658 829 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 BPIP17213 487 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 WT1P19544 449 aaPredicted RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 ID4P47928 161 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 GYS2P54840 703 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 PIGFQ07326 219 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 KRT81Q14533 505 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 NOMO1Q15155 1222 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 DHCR24Q15392 516 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 CYP2A13Q16696 494 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 TSTD2Q5T7W7 516 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 USP43Q70EL4 1123 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 DDX46Q7L014 1031 aaKnown RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 PGBD1Q96JS3 809 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 SLKQ9H2G2 1235 aaPredicted RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 UNKLQ9H9P5 680 aaKnown RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 IFT122Q9HBG6 1241 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 TOPORSQ9NS56 1045 aaPredicted RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 FOXJ2Q9P0K8 574 aa3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 ARPP21Q9UBL0 812 aaPredicted RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 SAP30BPQ9UHR5 308 aaKnown RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 AJAP1Q9UKB5 411 aaPredicted RBP3.38□□□□□ -1.87
NDUFA4-202ENST00000463308 GOLGA8AA7E2F4 631 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 NEMP1O14524 444 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 HAUS5O94927 633 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 PRKCGP05129 697 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 ELANEP08246 267 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 MT3P25713 68 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 SREBF1P36956 1147 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 GRIA3P42263 894 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 ALDH1A3P47895 512 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 PROK1P58294 105 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 RPS7P62081 194 aaKnown RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 CCT2P78371 535 aaKnown RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 SSBP2P81877 361 aaPredicted RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 EXOSC10Q01780 885 aaKnown RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 FPGSQ05932 587 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 SCAPQ12770 1279 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 MALLQ13021 153 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 LLGL1Q15334 1064 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 ADRM1Q16186 407 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 GEN1Q17RS7 908 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 CT47A1Q5JQC4 288 aaPredicted RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 METRNLQ641Q3 311 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 SEM1Q6ZVN7 128 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 KRTAP5-2Q701N4 177 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 UBR7Q8N806 425 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 B3GALNT2Q8NCR0 500 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 TOR1AIP2Q8NFQ8 470 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 FBXO18Q8NFZ0 1043 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 TBC1D15Q8TC07 691 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 TMEM125Q96AQ2 219 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 PUS7Q96PZ0 661 aaKnown RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 TIMP4Q99727 224 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 QRSL1Q9H0R6 528 aaKnown RBP3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 MTMR4Q9NYA4 1195 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 USP25Q9UHP3 1055 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 AATKQ6ZMQ8 1374 aa3.37□□□□□ -1.87
NDUFA4-202ENST00000463308 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 ENPP3O14638 875 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 KIAA0391O15091 583 aaKnown RBP3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 TP73O15350 636 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 BRINP1O60477 761 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 TTLL1O95922 423 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 SRGNP10124 158 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 SOX5P35711 763 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 POLGP54098 1239 aaPredicted RBP3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 ITIH3Q06033 890 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 STRN3Q13033 797 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 GRM1Q13255 1194 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 SF3B3Q15393 1217 aaKnown RBP3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 MUM1Q2TAK8 710 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 PLAC9Q5JTB6 97 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 FCRLBQ6BAA4 426 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 UBE3BQ7Z3V4 1068 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 TECPR1Q7Z6L1 1165 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 STRA8Q7Z7C7 330 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 NOP9Q86U38 636 aaKnown RBP3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 CMIPQ8IY22 773 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 AMOTL1Q8IY63 956 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 HAPLN3Q96S86 360 aa3.36□□□□□ -1.87
NDUFA4-202ENST00000463308 C7orf25Q9BPX7 421 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms