RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 PARD3BQ8TEW8 1205 aa21.89■■□□□ 1.09
NUP43-205ENST00000463048 MRPL38Q96DV4 380 aaKnown RBP21.89■■□□□ 1.09
NUP43-205ENST00000463048 MED15Q96RN5 788 aa21.89■■□□□ 1.09
NUP43-205ENST00000463048 ATG2AQ2TAZ0 1938 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 SF3B1O75533 1304 aaKnown RBP eCLIP21.88■■□□□ 1.09
NUP43-205ENST00000463048 SYCE3A1L190 88 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 CARNS1A5YM72 827 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 CXCL14O95715 111 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 UBE3AQ05086 875 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 TYRO3Q06418 890 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 BIRC3Q13489 604 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 DCAF17Q5H9S7 520 aaPredicted RBP21.88■■□□□ 1.09
NUP43-205ENST00000463048 TCERG1LQ5VWI1 586 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 KIAA1841Q6NSI8 718 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 RBM23Q86U06 439 aaKnown RBP21.88■■□□□ 1.09
NUP43-205ENST00000463048 NT5DC4Q86YG4 428 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 ZC3H3Q8IXZ2 948 aaKnown RBP21.88■■□□□ 1.09
NUP43-205ENST00000463048 TMEM174Q8WUU8 243 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 LMAN2LQ9H0V9 348 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 LZTS1Q9Y250 596 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 CDH23Q9H251 3354 aa21.88■■□□□ 1.09
NUP43-205ENST00000463048 HIDE1A8MVS5 230 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 PHACTR2O75167 634 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 SOD2P04179 222 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 BFSP1Q12934 665 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 TIGD5Q53EQ6 642 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 HSP90AA4PQ58FG1 418 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 DSTYKQ6XUX3 929 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 INTS8Q75QN2 995 aaKnown RBP21.87■■□□□ 1.09
NUP43-205ENST00000463048 TRAPPC11Q7Z392 1133 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 ELMO3Q96BJ8 720 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 HERC2P3Q9BVR0 1158 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 ZBP1Q9H171 429 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 DNAJC25Q9H1X3 360 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 ANO10Q9NW15 660 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 SIX4Q9UIU6 781 aa21.87■■□□□ 1.09
NUP43-205ENST00000463048 R3HCC1Q9Y3T6 440 aaKnown RBP21.87■■□□□ 1.09
NUP43-205ENST00000463048 TRANK1O15050 2925 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 ANO9A1A5B4 782 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 TMEM189-UBE2V1I3L0A0 370 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 PIRO00625 290 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 MAPK13O15264 365 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 SPTLC1O15269 473 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 SLC16A3O15427 465 aaKnown RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 URODP06132 367 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 TKTP29401 623 aaKnown RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 GCLMP48507 274 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 C1orf220Q5T0J3 134 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 PRSS55Q6UWB4 352 aaPredicted RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 ADGRD2Q7Z7M1 963 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 TMC2Q8TDI7 906 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 RIN2Q8WYP3 895 aaPredicted RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 CEP63Q96MT8 703 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 MKNK1Q9BUB5 465 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 IGFLR1Q9H665 355 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.86■■□□□ 1.09
NUP43-205ENST00000463048 ITGA11Q9UKX5 1188 aa21.86■■□□□ 1.09
NUP43-205ENST00000463048 TIMM13Q9Y5L4 95 aaPredicted RBP21.86■■□□□ 1.09
NUP43-205ENST00000463048 FSCN2O14926 492 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 PER2O15055 1255 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 TRAPPC3O43617 180 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 GLUD2P49448 558 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 RBP5P82980 135 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 SMC1AQ14683 1233 aaKnown RBP21.85■■□□□ 1.09
NUP43-205ENST00000463048 USP41Q3LFD5 358 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 TCEAL5Q5H9L2 206 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 RTP2Q5QGT7 225 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 TDRD10Q5VZ19 366 aaKnown RBP21.85■■□□□ 1.09
NUP43-205ENST00000463048 FILIP1Q7Z7B0 1213 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 GLYCTKQ8IVS8 523 aa21.85■■□□□ 1.09
NUP43-205ENST00000463048 ARMCX3Q9UH62 379 aaPredicted RBP21.85■■□□□ 1.09
NUP43-205ENST00000463048 SCN1AP35498 2009 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 CST3P01034 146 aaPredicted RBP21.84■■□□□ 1.09
NUP43-205ENST00000463048 CTSAP10619 480 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 RPL17P18621 184 aaKnown RBP21.84■■□□□ 1.09
NUP43-205ENST00000463048 GTF2F1P35269 517 aaKnown RBP eCLIP21.84■■□□□ 1.09
NUP43-205ENST00000463048 TAF6P49848 677 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 LILRA4P59901 499 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 PPP3CAQ08209 521 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 TRPC3Q13507 836 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 ANO6Q4KMQ2 910 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 USP37Q86T82 979 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 BORCS6Q96GS4 357 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 TTPALQ9BTX7 342 aa21.84■■□□□ 1.09
NUP43-205ENST00000463048 NSUN3Q9H649 340 aaKnown RBP21.84■■□□□ 1.09
NUP43-205ENST00000463048 MRPL17Q9NRX2 175 aaKnown RBP21.84■■□□□ 1.09
NUP43-205ENST00000463048 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.84■■□□□ 1.09
NUP43-205ENST00000463048 EFEMP2O95967 443 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 ERCC5P28715 1186 aaPredicted RBP21.83■■□□□ 1.09
NUP43-205ENST00000463048 NRIP1P48552 1158 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 ELAVL2Q12926 359 aaKnown RBP21.83■■□□□ 1.09
NUP43-205ENST00000463048 BMS1Q14692 1282 aaKnown RBP21.83■■□□□ 1.09
NUP43-205ENST00000463048 PTPN14Q15678 1187 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 ZSCAN23Q3MJ62 389 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 RNF168Q8IYW5 571 aaPredicted RBP21.83■■□□□ 1.09
NUP43-205ENST00000463048 CXorf38Q8TB03 319 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 HPDLQ96IR7 371 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 SUSD3Q96L08 255 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 SENP8Q96LD8 212 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms