RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SMIM35A0A1B0GVV1 85 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 RARBP10826 455 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 CYP2C9P11712 490 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 GZMAP12544 262 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 CCND3P30281 292 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 ADAM17P78536 824 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 TFAMQ00059 246 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 DUOXA2Q1HG44 320 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 KIZQ2M2Z5 673 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 GNASQ5JWF2 1037 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 SCARA3Q6AZY7 606 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 PEX26Q7Z412 305 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 CPB2Q96IY4 423 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 MS4A14Q96JA4 679 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 IMPG2Q9BZV3 1241 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 PDZD7Q9H5P4 517 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 RPF1Q9H9Y2 349 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 SRRDQ9UH36 339 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 GINS2Q9Y248 185 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 PCDHB4Q9Y5E5 795 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 GPR25O00155 361 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 MAP2K7O14733 419 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 BUB1BO60566 1050 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 TMEM191BP0C7N4 346 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 CXCL8P10145 99 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 ACO1P21399 889 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 TBXAS1P24557 533 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 HNRNPH2P55795 449 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 GPC5P78333 572 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 RHOT2Q8IXI1 618 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 EFCAB13Q8IY85 973 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 TMEM192Q8IY95 271 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 HNRNPLLQ8WVV9 542 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 UPF3AQ9H1J1 476 aaKnown RBP15.51■□□□□ 0.07
HDAC6-213ENST00000462730 CTTNBP2NLQ9P2B4 639 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 STXBP5LQ9Y2K9 1186 aa15.51■□□□□ 0.07
HDAC6-213ENST00000462730 TRIP12Q14669 1992 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-213ENST00000462730 C17orf102A2RUQ5 167 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 KCNK3O14649 394 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 TREHO43280 583 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 IL18RAPO95256 599 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 TNNC2P02585 160 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 MCF2P10911 925 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 BPIFB4P59827 614 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-213ENST00000462730 CLEC16AQ2KHT3 1053 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 CFAP221Q4G0U5 840 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 C7orf31Q8N865 590 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 SPATA4Q8NEY3 305 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 SPC25Q9HBM1 224 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 RNF14Q9UBS8 474 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 RAB21Q9UL25 225 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 COG5Q9UP83 839 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 SCN10AQ9Y5Y9 1956 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 ANK1P16157 1881 aa15.5■□□□□ 0.07
HDAC6-213ENST00000462730 ATMINO43313 823 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 B4GALT4O60513 344 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 TSPAN1O60635 241 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ADAMTS4O75173 837 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 GPR32O75388 356 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ERLIN2O94905 339 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ASS1P00966 412 aaKnown RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 CST3P01034 146 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ARF4P18085 180 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 HOXC8P31273 242 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 MYL6P60660 151 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ITIH3Q06033 890 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 GPS2Q13227 327 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 TRPC3Q13507 836 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 NT5DC3Q86UY8 548 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 MMGT1Q8N4V1 131 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 DNAJB3Q8WWF6 145 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ANKRD36BP1Q96IX9 119 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ADAMTS10Q9H324 1103 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 XPNPEP3Q9NQH7 507 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 AMFRQ9UKV5 643 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 PCDHB2Q9Y5E7 798 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 KPNA6O60684 536 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 HMGCRP04035 888 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 STAG3L1P0CL83 205 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 FGFR4P22455 802 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 HOXD10P28358 340 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 VSNL1P62760 191 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ACAD10Q6JQN1 1059 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 TMEM270Q6UE05 265 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ZNF677Q86XU0 584 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 RBBP8NLQ8NC74 664 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 ZNF653Q96CK0 615 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 PBKQ96KB5 322 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 OSMRQ99650 979 aa15.49■□□□□ 0.07
HDAC6-213ENST00000462730 MTG1Q9BT17 334 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-213ENST00000462730 H3BQF6 201 aa15.48■□□□□ 0.07
HDAC6-213ENST00000462730 TULP2O00295 520 aa15.48■□□□□ 0.07
HDAC6-213ENST00000462730 CES2O00748 559 aa15.48■□□□□ 0.07
HDAC6-213ENST00000462730 HADHBP55084 474 aaKnown RBP15.48■□□□□ 0.07
HDAC6-213ENST00000462730 TCEAL1Q15170 157 aa15.48■□□□□ 0.07
HDAC6-213ENST00000462730 BEND6Q5SZJ8 279 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-213ENST00000462730 GCOM2Q9BZD3 368 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-213ENST00000462730 ABCB6Q9NP58 842 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms