RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 SUSD3Q96L08 255 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 PHF7Q9BWX1 381 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-203ENST00000462700 EXOC1Q9NV70 894 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 DPP7Q9UHL4 492 aa20.44■□□□□ 0.86
COL9A3-203ENST00000462700 CIZ1Q9ULV3 898 aaPredicted RBP20.44■□□□□ 0.86
COL9A3-203ENST00000462700 GOLGA8IPA6NC78 632 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 GOLGA8JA6NMD2 632 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 ADAM12O43184 909 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 TGFB1I1O43294 461 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 ZNF202O95125 648 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 BMT2Q1RMZ1 405 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 KMT5BQ4FZB7 885 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 TMC5Q6UXY8 1006 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 NELFCDQ8IXH7 590 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 EFCAB13Q8IY85 973 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 GPD1LQ8N335 351 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 HDAC7Q8WUI4 952 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 PLEKHA4Q9H4M7 779 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 RBAKQ9NYW8 714 aaPredicted RBP20.43■□□□□ 0.86
COL9A3-203ENST00000462700 BACE2Q9Y5Z0 518 aa20.43■□□□□ 0.86
COL9A3-203ENST00000462700 C5orf42Q9H799 3197 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 PPEF2O14830 753 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 WEE2P0C1S8 567 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 SPATA31D3P0C874 917 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 MTHFRP42898 656 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 AARSP49588 968 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL9A3-203ENST00000462700 WNT7BP56706 349 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 VARS2Q5ST30 1063 aaKnown RBP20.42■□□□□ 0.86
COL9A3-203ENST00000462700 RSPO2Q6UXX9 243 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-203ENST00000462700 SPATA31D4Q6ZUB0 917 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 CMASQ8NFW8 434 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-203ENST00000462700 FEZF2Q8TBJ5 459 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 NOC3LQ8WTT2 800 aaKnown RBP20.42■□□□□ 0.86
COL9A3-203ENST00000462700 RIPOR3Q96MK2 946 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 NECTIN4Q96NY8 510 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 AGPAT3Q9NRZ7 376 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 TCHHQ07283 1943 aa20.42■□□□□ 0.86
COL9A3-203ENST00000462700 PLXNA3P51805 1871 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 VWA8A3KMH1 1905 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 GOLGA6L4A6NEF3 574 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 M0QZQ0 153 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 RPN1P04843 607 aaKnown RBP20.41■□□□□ 0.86
COL9A3-203ENST00000462700 OR1D2P34982 312 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 SNRPFP62306 86 aaKnown RBP20.41■□□□□ 0.86
COL9A3-203ENST00000462700 DPYDQ12882 1025 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 STK4Q13043 487 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 PSMD2Q13200 908 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 C9orf57Q5W0N0 161 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 GPR149Q86SP6 731 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 NT5DC4Q86YG4 428 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 KIAA0895Q8NCT3 520 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 KREMEN2Q8NCW0 462 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 POMKQ9H5K3 350 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 FBXW11Q9UKB1 542 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 PCDHB8Q9UN66 801 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 CDY1Q9Y6F8 540 aa20.41■□□□□ 0.86
COL9A3-203ENST00000462700 ANO9A1A5B4 782 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 LOC730098B7Z3J9 87 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 PIRO00625 290 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 RFPL2O75678 378 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 RAB33AQ14088 237 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 MRPL58Q14197 206 aaKnown RBP20.4■□□□□ 0.86
COL9A3-203ENST00000462700 KNOP1Q1ED39 458 aaKnown RBP20.4■□□□□ 0.86
COL9A3-203ENST00000462700 ATAT1Q5SQI0 421 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 C15orf39Q6ZRI6 1047 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 HS2ST1Q7LGA3 356 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 FMR1NBQ8N0W7 255 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-203ENST00000462700 APPL2Q8NEU8 664 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 DPP3Q9NY33 737 aa20.4■□□□□ 0.86
COL9A3-203ENST00000462700 CCDC195A0A1B0GUA6 201 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 H7C4K7 107 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 CLIC2O15247 247 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 TBC1D4O60343 1298 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 PAPLNO95428 1278 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.85
COL9A3-203ENST00000462700 LILRA4P59901 499 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 SLC8B1Q6J4K2 584 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 CBWD2Q8IUF1 395 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 KHSRPQ92945 711 aaKnown RBP eCLIP20.39■□□□□ 0.85
COL9A3-203ENST00000462700 RPGRIP1Q96KN7 1286 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 KIAA1586Q9HCI6 787 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 ZDHHC7Q9NXF8 308 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 CGNQ9P2M7 1197 aaKnown RBP20.39■□□□□ 0.85
COL9A3-203ENST00000462700 TTC28Q96AY4 2481 aa20.39■□□□□ 0.85
COL9A3-203ENST00000462700 ZNF233A6NK53 670 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 TULP1O00294 542 aaPredicted RBP20.38■□□□□ 0.85
COL9A3-203ENST00000462700 SPTLC1O15269 473 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 ZMYND10O75800 440 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 PAX3P23760 479 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 TFAMQ00059 246 aaKnown RBP20.38■□□□□ 0.85
COL9A3-203ENST00000462700 ZNF280DQ6N043 979 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 CYP26C1Q6V0L0 522 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 DSTYKQ6XUX3 929 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 CCDC47Q96A33 483 aaKnown RBP20.38■□□□□ 0.85
COL9A3-203ENST00000462700 CCDC34Q96HJ3 373 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 RHOBTB2Q9BYZ6 727 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 PDE11AQ9HCR9 933 aa20.38■□□□□ 0.85
COL9A3-203ENST00000462700 FBXL5Q9UKA1 691 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms