RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 OR8H1Q8NGG4 311 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 PLEKHO2Q8TD55 490 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 SNX21Q969T3 373 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 JAKMIP1Q96N16 626 aaKnown RBP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 YME1L1Q96TA2 773 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 VRK1Q99986 396 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 NCAPGQ9BPX3 1015 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 DUSP23Q9BVJ7 150 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 YIPF2Q9BWQ6 316 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 TWSG1Q9GZX9 223 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 PABPC3Q9H361 631 aaKnown RBP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 SEMA6BQ9H3T3 888 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 PI4KBQ9UBF8 816 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 MTRRQ9UBK8 725 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 C19orf53Q9UNZ5 99 aaPredicted RBP8.12□□□□□ -1.11
LRCH3-210ENST00000461674 PCDHA1Q9Y5I3 950 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 CAPN6Q9Y6Q1 641 aa8.12□□□□□ -1.11
LRCH3-210ENST00000461674 hCG_1807616A0A1W2PRN6 198 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 SLC27A2O14975 620 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 DYNC1LI2O43237 492 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 FKTNO75072 461 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 HMMRO75330 724 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 MLYCDO95822 493 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 IGHDP01880 384 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 KRT1P04264 644 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 CLTBP09497 229 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 MALP21145 153 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 AARSP49588 968 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 TARDBPQ13148 414 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 ZNF783Q6ZMS7 281 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 GAREM2Q75VX8 874 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 PRPF39Q86UA1 669 aaKnown RBP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 TSPYL5Q86VY4 417 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 MICU3Q86XE3 530 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 OSBPL6Q9BZF3 934 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 EDEM3Q9BZQ6 932 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 DUSP15Q9H1R2 295 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 CXorf56Q9H5V9 222 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 SYNCQ9H7C4 482 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 SMURF2Q9HAU4 748 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 SPON1Q9HCB6 807 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 ATP13A2Q9NQ11 1180 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 INCENPQ9NQS7 918 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 PRDM8Q9NQV8 689 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 RGS17Q9UGC6 210 aaPredicted RBP8.11□□□□□ -1.11
LRCH3-210ENST00000461674 ABCC10Q5T3U5 1492 aa8.11□□□□□ -1.11
LRCH3-210ENST00000461674 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 GTPBP1O00178 669 aaKnown RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 FCHO1O14526 889 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 AP3D1O14617 1153 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SPTLC2O15270 562 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 NRP2O60462 931 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 OPHN1O60890 802 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 ENDOD1O94919 500 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 NPPBP16860 134 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 AP2B1P63010 937 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 IFI35P80217 286 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 TEKQ02763 1124 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 TLE1Q04724 770 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SNAPC2Q13487 334 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 PKN2Q16513 984 aaKnown RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SLC44A4Q53GD3 710 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 RRAGBQ5VZM2 374 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 STEAP3Q658P3 488 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SEZ6L2Q6UXD5 910 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MFSD6Q6ZSS7 791 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 UNC13DQ70J99 1090 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MILR1Q7Z6M3 343 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 LCA5Q86VQ0 697 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 PPP1R3BQ86XI6 285 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 GLB1L2Q8IW92 636 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 OR6Y1Q8NGX8 325 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 PHOSPHO1Q8TCT1 267 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 HOXB13Q92826 284 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 RAB24Q969Q5 203 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SNX27Q96L92 541 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 PITHD1Q9GZP4 211 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MTG2Q9H4K7 406 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MANSC1Q9H8J5 431 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 ERVK13-1Q9NX77 482 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 ZNF212Q9UDV6 495 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 RPS6KA6Q9UK32 745 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MED16Q9Y2X0 877 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 MTO1Q9Y2Z2 717 aaKnown RBP8.1□□□□□ -1.11
LRCH3-210ENST00000461674 HS3ST4Q9Y661 456 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 CYP46A1Q9Y6A2 500 aa8.1□□□□□ -1.11
LRCH3-210ENST00000461674 GRIN2AQ12879 1464 aa8.09□□□□□ -1.11
LRCH3-210ENST00000461674 PRAMEF22A3QJZ6 481 aa8.09□□□□□ -1.11
LRCH3-210ENST00000461674 PRR33A8MZF0 331 aa8.09□□□□□ -1.11
LRCH3-210ENST00000461674 CHL1O00533 1208 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms