RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RIBC1Q8N443 379 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 MMP19Q99542 508 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 VIPAS39Q9H9C1 493 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 RAVER2Q9HCJ3 691 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 TMEM191CA6NGB0 347 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 TRPC5OSA6NMA1 111 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 DLGAP3O95886 979 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 CYP2E1P05181 493 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 NUP107P57740 925 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 USP39Q53GS9 565 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 SWSAP1Q6NVH7 229 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ZNF544Q6NX49 715 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 UNC5CLQ8IV45 518 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ALG13Q9NP73 1137 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 AP4S1Q9Y587 144 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 EMSYQ7Z589 1322 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 ATP10BO94823 1461 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 FAM47DPA6NHR8 397 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 CHN1P15882 459 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 TRIM16LQ309B1 348 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 TTC39BQ5VTQ0 682 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 OOSP2Q86WS3 158 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 DDI1Q8WTU0 396 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 DNAJC7Q99615 494 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 RNF146Q9NTX7 359 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 IMPAD1Q9NX62 359 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 CNTN1Q12860 1018 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 PTRHD1Q6GMV3 140 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 C18orf8Q96DM3 657 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 HSPBP1Q9NZL4 362 aa9.42□□□□□ -0.9
BRCA1-205ENST00000461221 XPO7Q9UIA9 1087 aaKnown RBP9.42□□□□□ -0.9
BRCA1-205ENST00000461221 PTPRTO14522 1441 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ASB14A6NK59 587 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 POTECB2RU33 542 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 F8W810 466 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SCP2P22307 547 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 CCDC60Q8IWA6 550 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 VPS33BQ9H267 617 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PIH1D3Q9NQM4 214 aaKnown RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 NMRK1Q9NWW6 199 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 VPS9D1Q9Y2B5 631 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 CYP2D7A0A087X1C5 515 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 RSPH10B2B2RC85 870 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 H2AFYO75367 372 aaKnown RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 RSPH10BP0C881 870 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PIGHQ14442 188 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 GRM4Q14833 912 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 IFNEQ86WN2 208 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 CNDP1Q96KN2 507 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SPATA33Q96N06 139 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 LXNQ9BS40 222 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ROPN1BQ9BZX4 212 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 BRD8Q9H0E9 1235 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ROPN1Q9HAT0 212 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PAK5Q9P286 719 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PDP2Q9P2J9 529 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 TCOF1Q13428 1488 aaKnown RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 AIM2O14862 343 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 UGT3A1Q6NUS8 523 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 TTC33Q6PID6 262 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 GALNT4Q8N4A0 578 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 AIFM3Q96NN9 605 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 RBM15Q96T37 977 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SIKE1Q9BRV8 207 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 THTPAQ9BU02 230 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 EPS8L2Q9H6S3 715 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 CATSPERBQ9H7T0 1116 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PCMTD2Q9NV79 361 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 GRID1Q9ULK0 1009 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 EEF2KO00418 725 aaKnown RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 FYNP06241 537 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 PTK7Q13308 1070 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SMAD1Q15797 465 aaKnown RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SLC44A4Q53GD3 710 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ARMCX4Q5H9R4 360 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 TLK2Q86UE8 772 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 SPATA4Q8NEY3 305 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 IL17RAQ96F46 866 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 OLFM1Q99784 485 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-205ENST00000461221 ACAD9Q9H845 621 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 TUFT1Q9NNX1 390 aa9.41□□□□□ -0.9
BRCA1-205ENST00000461221 POLBP06746 335 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 SNRPAP09012 282 aaKnown RBP9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PHKG1Q16816 387 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 LRRC36Q1X8D7 754 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 STKLD1Q8NE28 680 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 MASTLQ96GX5 879 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 CNPY3Q9BT09 278 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 SPACA6W5XKT8 324 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 E7ENQ6 273 aa9.4□□□□□ -0.9
BRCA1-205ENST00000461221 PDXKO00764 312 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms