RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 GPR152Q8TDT2 470 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 POMGNT1Q8WZA1 660 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 LPPQ93052 612 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 ACAP3Q96P50 834 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 MSTO1Q9BUK6 570 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 ZBP1Q9H171 429 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 NXF3Q9H4D5 531 aaKnown RBP13.64□□□□□ -0.23
HDAC4-207ENST00000461113 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 USP20Q9Y2K6 914 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
HDAC4-207ENST00000461113 KIAA0391O15091 583 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 SPTLC1O15269 473 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 N4BP1O75113 896 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 LRRN2O75325 713 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 MBD3O95983 291 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 CLTAP09496 248 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 GRM5P41594 1212 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 MCL1Q07820 350 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 PNOCQ13519 176 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 STIM1Q13586 685 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 PPM1JQ5JR12 505 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 SMG8Q8ND04 991 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 ZNF507Q8TCN5 953 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 FOXQ1Q9C009 403 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 CDT1Q9H211 546 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 CGNQ9P2M7 1197 aaKnown RBP13.63□□□□□ -0.23
HDAC4-207ENST00000461113 HES2Q9Y543 173 aa13.63□□□□□ -0.23
HDAC4-207ENST00000461113 ZMYM2Q9UBW7 1377 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 OGTO15294 1046 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 OFD1O75665 1012 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 PPP1R37O75864 691 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 SRFP11831 508 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 PROZP22891 400 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 AKAP5P24588 427 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 BCAR1P56945 870 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 OSTNP61366 133 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 ARMCX5Q6P1M9 558 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 HPS3Q969F9 1004 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 TMEM169Q96HH4 297 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 GAD1Q99259 594 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 STRA6Q9BX79 667 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 AGO2Q9UKV8 859 aaKnown RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-207ENST00000461113 TCHHQ07283 1943 aa13.62□□□□□ -0.23
HDAC4-207ENST00000461113 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 A0A0B4J269 797 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 ARL5CA6NH57 179 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 KLRC4O43908 158 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 RECQL4O94761 1208 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 EDN1P05305 212 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 GARTP22102 1010 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 TGM1P22735 817 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 MLH1P40692 756 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 PPP1R2P41236 205 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 CASP5P51878 434 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 CSTF1Q05048 431 aaKnown RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 ACAP1Q15027 740 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 CD302Q8IX05 232 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 PJA1Q8NG27 643 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 NOC3LQ8WTT2 800 aaKnown RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 ATRIPQ8WXE1 791 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 SLC38A7Q9NVC3 462 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 KLK14Q9P0G3 267 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
HDAC4-207ENST00000461113 PCDHA5Q9Y5H7 936 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 IRAK3Q9Y616 596 aa13.61□□□□□ -0.23
HDAC4-207ENST00000461113 ANKRD63C9JTQ0 380 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 LAMTOR5O43504 91 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 CALUO43852 315 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-207ENST00000461113 POMCP01189 267 aa13.6□□□□□ -0.23
HDAC4-207ENST00000461113 ALDH2P05091 517 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms