RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ERP44Q9BS26 406 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ADAM33Q9BZ11 813 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 G3BP2Q9UN86 482 aaKnown RBP16.38■□□□□ 0.21
LMNB1-203ENST00000460265 ADGRA3Q8IWK6 1321 aa16.38■□□□□ 0.21
LMNB1-203ENST00000460265 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
LMNB1-203ENST00000460265 H0YCG3 227 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 ECEL1O95672 775 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 OATP04181 439 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 GJB1P08034 283 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 VIMP08670 466 aaKnown RBP16.37■□□□□ 0.21
LMNB1-203ENST00000460265 SP2Q02086 613 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 HES6Q96HZ4 224 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
LMNB1-203ENST00000460265 ZSWIM1Q9BR11 485 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 MLXIPLQ9NP71 852 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 A0A0A6YYK5 440 aaPredicted RBP16.37■□□□□ 0.21
LMNB1-203ENST00000460265 TCRBV7S2A1N4TA0A589 114 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
LMNB1-203ENST00000460265 VGLL4Q14135 290 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 KIF22Q14807 665 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 ANKRD42Q8N9B4 389 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 ASAP3Q8TDY4 903 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 ZNF148Q9UQR1 794 aa16.37■□□□□ 0.21
LMNB1-203ENST00000460265 PIK3R2O00459 728 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 TLR3O15455 904 aaKnown RBP16.36■□□□□ 0.21
LMNB1-203ENST00000460265 P4HA2O15460 535 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 RAB27AP51159 221 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 FMO1Q01740 532 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 CATSPERGQ6ZRH7 1159 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 KLRG1Q96E93 195 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 XPNPEP1Q9NQW7 623 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 TTC7AQ9ULT0 858 aaPredicted RBP16.36■□□□□ 0.21
LMNB1-203ENST00000460265 AGTPBP1Q9UPW5 1226 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 PASKQ96RG2 1323 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 KCNA2P16389 499 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 BPIFB4P59827 614 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 NCOA4Q13772 614 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 ANKS4BQ8N8V4 417 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 MDM1Q8TC05 714 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 PPP1R13LQ8WUF5 828 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 VTI1AQ96AJ9 217 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 SPATA33Q96N06 139 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 TIPINQ9BVW5 301 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 RANBP1P43487 201 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 MAPK6Q16659 721 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 TRIM68Q6AZZ1 485 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 AKT3Q9Y243 479 aa16.36■□□□□ 0.21
LMNB1-203ENST00000460265 GAS8O95995 478 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PMS2P54278 862 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 NOP14P78316 857 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 MYBPC2Q14324 1141 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 SLMAPQ14BN4 828 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 FAM133BQ5BKY9 247 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 FAM71AQ8IYT1 594 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 GPR88Q9GZN0 384 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 EXTL3O43909 919 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PAPOLAP51003 745 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 NCKAP1LP55160 1127 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 SLC29A2Q14542 456 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PPP2R5EQ16537 467 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 SLFN12LQ6IEE8 588 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 ACAD10Q6JQN1 1059 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 ATP8B4Q8TF62 1192 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 SEPT1Q8WYJ6 367 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 CLMNQ96JQ2 1002 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 EBF2Q9HAK2 575 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PAPOLBQ9NRJ5 636 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PPATQ06203 517 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 GJC2Q5T442 439 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 RBBP8NLQ8NC74 664 aaPredicted RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
LMNB1-203ENST00000460265 COPS5Q92905 334 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 MTMR12Q9C0I1 747 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 PCDHB2Q9Y5E7 798 aa16.35■□□□□ 0.21
LMNB1-203ENST00000460265 TTC36A6NLP5 189 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 FBXO16Q8IX29 292 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 OR5B17Q8NGF7 314 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 CCHCR1Q8TD31 782 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 AGAP11Q8TF27 550 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 SHC3Q92529 594 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 GTF3C4Q9UKN8 822 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 CORO1CQ9ULV4 474 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 PFASO15067 1338 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 DNAJC8O75937 253 aaPredicted RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 RGS20O76081 388 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 TXNP10599 105 aaKnown RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 GLRA2P23416 452 aa16.34■□□□□ 0.21
LMNB1-203ENST00000460265 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
LMNB1-203ENST00000460265 LAMB3Q13751 1172 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms