RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TRIM67Q6ZTA4 783 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 STXBP4Q6ZWJ1 553 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 RTL10Q7L3V2 364 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 SYCP3Q8IZU3 236 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 APPL2Q8NEU8 664 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 FAM212AQ96EL1 285 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 TRIM9Q9C026 710 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 ASB7Q9H672 318 aa17.51■□□□□ 0.39
COL7A1-203ENST00000459756 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
COL7A1-203ENST00000459756 C8AP07357 584 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 ADSSP30520 456 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 MRPL58Q14197 206 aaKnown RBP17.5■□□□□ 0.39
COL7A1-203ENST00000459756 TMEM132DQ14C87 1099 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 SPATA1Q5VX52 437 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 RESP18Q5W5W9 173 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 JADE1Q6IE81 842 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 RSPO2Q6UXX9 243 aaPredicted RBP17.5■□□□□ 0.39
COL7A1-203ENST00000459756 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 PYM1Q9BRP8 204 aaKnown RBP17.5■□□□□ 0.39
COL7A1-203ENST00000459756 IKZF4Q9H2S9 585 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 LIMD1Q9UGP4 676 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 PCDHB8Q9UN66 801 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 SORCS3Q9UPU3 1222 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 C2CD2Q9Y426 696 aa17.5■□□□□ 0.39
COL7A1-203ENST00000459756 TECTAO75443 2155 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 M0QZQ0 153 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 TBC1D4O60343 1298 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 NFICP08651 508 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 POU2F2P09086 479 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 PAX3P23760 479 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 AARSP49588 968 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL7A1-203ENST00000459756 SIGLEC14Q08ET2 396 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 MTMR3Q13615 1198 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 UBALD2Q8IYN6 164 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 ZNF461Q8TAF7 563 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 SLC7A14Q8TBB6 771 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 C7orf25Q9BPX7 421 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 FGFBP2Q9BYJ0 223 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 TMEM206Q9H813 350 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 HCN4Q9Y3Q4 1203 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 ANK1P16157 1881 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 MYO10Q9HD67 2058 aa17.49■□□□□ 0.39
COL7A1-203ENST00000459756 TMEM221A6NGB7 291 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 M0R296 226 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 XYLBO75191 536 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 ABLIM3O94929 683 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 IL18RAPO95256 599 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 GARTP22102 1010 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 GUCY2FP51841 1108 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 ASIC1P78348 528 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 ROR1Q01973 937 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 CTXN3Q4LDR2 81 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 ZNF280DQ6N043 979 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 CRELD2Q6UXH1 353 aaPredicted RBP17.48■□□□□ 0.39
COL7A1-203ENST00000459756 HFE2Q6ZVN8 426 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 BMP8AQ7Z5Y6 402 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 OXCT2Q9BYC2 517 aaPredicted RBP17.48■□□□□ 0.39
COL7A1-203ENST00000459756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL7A1-203ENST00000459756 FBXL5Q9UKA1 691 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 ZDHHC9Q9Y397 364 aa17.48■□□□□ 0.39
COL7A1-203ENST00000459756 N4BP1O75113 896 aaKnown RBP17.47■□□□□ 0.39
COL7A1-203ENST00000459756 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
COL7A1-203ENST00000459756 OAZ2O95190 189 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 LDHAP00338 332 aaKnown RBP17.47■□□□□ 0.39
COL7A1-203ENST00000459756 ASGR2P07307 311 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 GBP2P32456 591 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-203ENST00000459756 KRT85P78386 507 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 C9orf57Q5W0N0 161 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 TPGS2Q68CL5 300 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 NT5DC4Q86YG4 428 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 TMEM130Q8N3G9 435 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 MFSD14AQ96MC6 490 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 FAM213AQ9BRX8 229 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 EPS15L1Q9UBC2 864 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 RAPGEFL1Q9UHV5 662 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 KCNH3Q9ULD8 1083 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 ATP6V1DQ9Y5K8 247 aa17.47■□□□□ 0.39
COL7A1-203ENST00000459756 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 WDR27A2RRH5 827 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 PIRO00625 290 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 KIAA0391O15091 583 aaKnown RBP17.46■□□□□ 0.39
COL7A1-203ENST00000459756 CCL16O15467 120 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 ATF2P15336 505 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 FSHRP23945 695 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 ELF1P32519 619 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 ARPP19P56211 112 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 LILRA4P59901 499 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 YWHAHQ04917 246 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-203ENST00000459756 BECN1Q14457 450 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 DSTYKQ6XUX3 929 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 GRASPQ7Z6J2 395 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-203ENST00000459756 USP37Q86T82 979 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 TCEAL8Q8IYN2 117 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-203ENST00000459756 HPS3Q969F9 1004 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 PBXIP1Q96AQ6 731 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 SPATA32Q96LK8 384 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 IGSF9Q9P2J2 1179 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 MAFFQ9ULX9 164 aa17.46■□□□□ 0.39
COL7A1-203ENST00000459756 ARIH1Q9Y4X5 557 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms