RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 SLC9A9Q8IVB4 645 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 ADSSL1Q8N142 457 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 EFHBQ8N7U6 833 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 C1orf127Q8N9H9 656 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 GOLGA5Q8TBA6 731 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 HLA-CQ95604 372 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 MFSD14AQ96MC6 490 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 MTMR12Q9C0I1 747 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 UBE2ZQ9H832 354 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-205ENST00000457463 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
CNOT3-205ENST00000457463 CLEC1BQ9P126 229 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
CNOT3-205ENST00000457463 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-205ENST00000457463 DERAQ9Y315 318 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 NUB1Q9Y5A7 615 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 TIMM13Q9Y5L4 95 aaPredicted RBP13.22□□□□□ -0.29
CNOT3-205ENST00000457463 HCFC2Q9Y5Z7 792 aa13.22□□□□□ -0.29
CNOT3-205ENST00000457463 CALUO43852 315 aaPredicted RBP13.21□□□□□ -0.29
CNOT3-205ENST00000457463 AKAP3O75969 853 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 ITGB3P05106 788 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 DLATP10515 647 aaKnown RBP13.21□□□□□ -0.29
CNOT3-205ENST00000457463 EPCAMP16422 314 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 NR2F2P24468 414 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
CNOT3-205ENST00000457463 MCM4P33991 863 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 DLG4P78352 724 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 PSMD6Q15008 389 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 CEP135Q66GS9 1140 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 ANKRD40Q6AI12 368 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 SLC22A17Q8WUG5 538 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 BORCS6Q96GS4 357 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 TSPAN18Q96SJ8 248 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 RXFP1Q9HBX9 757 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 INTS13Q9NVM9 706 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 CDH22Q9UJ99 828 aa13.21□□□□□ -0.29
CNOT3-205ENST00000457463 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 LRRIQ3A6PVS8 624 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 KIF20AO95235 890 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 SPATA31D3P0C874 917 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 AARSP49588 968 aaKnown RBP eCLIP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 KCNQ1P51787 676 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 LILRA4P59901 499 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 ADAM9Q13443 819 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 PSMD5Q16401 504 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 COBLL1Q53SF7 1204 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
CNOT3-205ENST00000457463 TMEM174Q8WUU8 243 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 PIK3R5Q8WYR1 880 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 CLSTN3Q9BQT9 956 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 APOL5Q9BWW9 433 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 AGAP1Q9UPQ3 857 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 VCANP13611 3396 aa13.2□□□□□ -0.3
CNOT3-205ENST00000457463 CST3P01034 146 aaPredicted RBP13.19□□□□□ -0.3
CNOT3-205ENST00000457463 KRT19P08727 400 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 TMEM191BP0C7N4 346 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 TNNI1P19237 187 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 KLRC2P26717 231 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 NDUFV1P49821 464 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 CLCN4P51793 760 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 STX17P56962 302 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 ELAVL2Q12926 359 aaKnown RBP13.19□□□□□ -0.3
CNOT3-205ENST00000457463 NFIL3Q16649 462 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
CNOT3-205ENST00000457463 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 TRAPPC11Q7Z392 1133 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 WDR49Q8IV35 697 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
CNOT3-205ENST00000457463 PARD3BQ8TEW8 1205 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 MSLNLQ96KJ4 702 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 SENP8Q96LD8 212 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 CDCA3Q99618 268 aaPredicted RBP13.19□□□□□ -0.3
CNOT3-205ENST00000457463 CGRRF1Q99675 332 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 EMILIN2Q9BXX0 1053 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 NUP62CLQ9H1M0 184 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 COG5Q9UP83 839 aa13.19□□□□□ -0.3
CNOT3-205ENST00000457463 M0QZQ0 153 aa13.18□□□□□ -0.3
CNOT3-205ENST00000457463 SYN3O14994 580 aa13.18□□□□□ -0.3
CNOT3-205ENST00000457463 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
CNOT3-205ENST00000457463 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
CNOT3-205ENST00000457463 CCNE1P24864 410 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms