RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 KREMEN2Q8NCW0 462 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 HDAC7Q8WUI4 952 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 CACTINQ8WUQ7 758 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 SUSD6Q92537 303 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 CLSTN3Q9BQT9 956 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 CBWD1Q9BRT8 395 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 PIDD1Q9HB75 910 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 TSHZ2Q9NRE2 1034 aa19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 RBAKQ9NYW8 714 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-215ENST00000456545 XIRP2A4UGR9 3374 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 PDCD11Q14690 1871 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 CCDC195A0A1B0GUA6 201 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 ZNF202O95125 648 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 C1RP00736 705 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 GUCY2FP51841 1108 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 ARPP19P56211 112 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 LIN9Q5TKA1 542 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 CRELD2Q6UXH1 353 aaPredicted RBP19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 USP37Q86T82 979 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 SUSD3Q96L08 255 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 CD320Q9NPF0 282 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 DPP3Q9NY33 737 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 C2CD2Q9Y426 696 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 NR2E1Q9Y466 385 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 CDY1Q9Y6F8 540 aa19.59■□□□□ 0.73
PDLIM2-215ENST00000456545 UBE4BO95155 1302 aa19.58■□□□□ 0.73
PDLIM2-215ENST00000456545 FAM237AA0A1B0GTK4 181 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 ZNF233A6NK53 670 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 TFAMQ00059 246 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 KMT5BQ4FZB7 885 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 VARS2Q5ST30 1063 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 KRBA2Q6ZNG9 492 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 EPM2AIP1Q7L775 607 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 GPR149Q86SP6 731 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 NT5DC4Q86YG4 428 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 KIAA1586Q9HCI6 787 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 MTRRQ9UBK8 725 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 PCDHB8Q9UN66 801 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 BACE2Q9Y5Z0 518 aa19.58■□□□□ 0.72
PDLIM2-215ENST00000456545 C19orf67A6NJJ6 358 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 CLIC2O15247 247 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 RPN1P04843 607 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 SP100P23497 879 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 PAX3P23760 479 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 ELF1P32519 619 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 SNRPFP62306 86 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 RAB33AQ14088 237 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 SURF1Q15526 300 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 CTXN3Q4LDR2 81 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 C9orf57Q5W0N0 161 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 LILRA6Q6PI73 481 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 BRSK2Q8IWQ3 736 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 TMEM130Q8N3G9 435 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 ZSWIM2Q8NEG5 633 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 SCFD1Q8WVM8 642 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 GOLPH3LQ9H4A5 285 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 POMKQ9H5K3 350 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 HSPBP1Q9NZL4 362 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 CDH22Q9UJ99 828 aa19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-215ENST00000456545 PLXNA3P51805 1871 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 ARHGEF37A1IGU5 675 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 KLRC4O43908 158 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 RFPL2O75678 378 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 KIF20AO95235 890 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 CYP2J2P51589 502 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 EHHADHQ08426 723 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 KNOP1Q1ED39 458 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 PPM1LQ5SGD2 360 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 ZNF280DQ6N043 979 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 CYP26C1Q6V0L0 522 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 C15orf39Q6ZRI6 1047 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 RDH13Q8NBN7 331 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 CMASQ8NFW8 434 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 SMG7Q92540 1137 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 ZDHHC7Q9NXF8 308 aa19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-215ENST00000456545 VWA8A3KMH1 1905 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 MTCL1Q9Y4B5 1905 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 ADAM12O43184 909 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 TMEM191BP0C7N4 346 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 ALADP13716 330 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 HOXD13P35453 343 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 LILRA4P59901 499 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 YWHAHQ04917 246 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 PDE11AQ9HCR9 933 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 AGPAT3Q9NRZ7 376 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 POLIQ9UNA4 740 aa19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 TIMM13Q9Y5L4 95 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-215ENST00000456545 LOC730098B7Z3J9 87 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 M0QZQ0 153 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 PIRO00625 290 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 TGFB1I1O43294 461 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 ZMYND10O75800 440 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 C8AP07357 584 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 ODC1P11926 461 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 TAF6P49848 677 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 STK4Q13043 487 aa19.54■□□□□ 0.72
PDLIM2-215ENST00000456545 CCDC149Q6ZUS6 474 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms