RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
LMCD1-206ENST00000456506 CEP72Q9P209 647 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 NCDNQ9UBB6 729 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
LMCD1-206ENST00000456506 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 E9PMD0 336 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 LRG1P02750 347 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 MCF2P10911 925 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 CCT6AP40227 531 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 OSTNP61366 133 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 PDIA5Q14554 519 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 IL17AQ16552 155 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 SLC10A6Q3KNW5 377 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 TPGS2Q68CL5 300 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 HAUS3Q68CZ6 603 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 KCNK18Q7Z418 384 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 ATRIPQ8WXE1 791 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 SMARCD2Q92925 531 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 NTPCRQ9BSD7 190 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 MMTAG2Q9BU76 263 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 CCDC94Q9BW85 323 aaPredicted RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 FAM126AQ9BYI3 521 aaPredicted RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 CYP4F11Q9HBI6 524 aa13.03□□□□□ -0.32
LMCD1-206ENST00000456506 TOPORSQ9NS56 1045 aaPredicted RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 DDX19AQ9NUU7 478 aaKnown RBP13.03□□□□□ -0.32
LMCD1-206ENST00000456506 ATG2BQ96BY7 2078 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 PP2D1A8MPX8 630 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 PRRG1O14668 218 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 NCAM2O15394 837 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 HIP1RO75146 1068 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 CHRNB1P11230 501 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 NEK4P51957 841 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 TMC8Q8IU68 726 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 GPR161Q8N6U8 529 aaKnown RBP13.02□□□□□ -0.33
LMCD1-206ENST00000456506 DDX12PQ92771 950 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 TRMT61BQ9BVS5 477 aaKnown RBP13.02□□□□□ -0.33
LMCD1-206ENST00000456506 MRPL4Q9BYD3 311 aaKnown RBP13.02□□□□□ -0.33
LMCD1-206ENST00000456506 HAPLN2Q9GZV7 340 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 ZFP14Q9HCL3 533 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 SLC38A7Q9NVC3 462 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 LRWD1Q9UFC0 647 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
LMCD1-206ENST00000456506 AFF4Q9UHB7 1163 aaKnown RBP13.02□□□□□ -0.33
LMCD1-206ENST00000456506 MRPS17Q9Y2R5 130 aaKnown RBP13.02□□□□□ -0.33
LMCD1-206ENST00000456506 PTPRDP23468 1912 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 SPTBN2O15020 2390 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 H7C4K7 107 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 M0QZQ0 153 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 GJA1P17302 382 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 PSMC3P17980 439 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 VIPR2P41587 438 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 TRAPPC10P48553 1259 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 AARSP49588 968 aaKnown RBP eCLIP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 MLLT6P55198 1093 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 TWF1Q12792 350 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 ZBTB6Q15916 424 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 CTXN3Q4LDR2 81 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 SEZ6Q53EL9 994 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 RINT1Q6NUQ1 792 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 SHKBP1Q8TBC3 707 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 IRF7Q92985 503 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 C8orf76Q96K31 380 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 ACAP3Q96P50 834 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 IER2Q9BTL4 223 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 MKNK1Q9BUB5 465 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 CNTNAP3Q9BZ76 1288 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 DNAJC25Q9H1X3 360 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 BRD9Q9H8M2 597 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 KMT5AQ9NQR1 393 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 MAFFQ9ULX9 164 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 NDRG2Q9UN36 371 aaKnown RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 PCDHB8Q9UN66 801 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
LMCD1-206ENST00000456506 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
LMCD1-206ENST00000456506 LAMA1P25391 3075 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 CCDC169A6NNP5 214 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 MAN2B1O00754 1011 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 ZNF197O14709 1029 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 FAM189A1O60320 539 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 OAZ2O95190 189 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 SEC24BO95487 1268 aa13□□□□□ -0.33
LMCD1-206ENST00000456506 U2AF2P26368 475 aaKnown RBP eCLIP13□□□□□ -0.33
LMCD1-206ENST00000456506 GDI1P31150 447 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms