RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 RUSC1Q9BVN2 902 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 BRD9Q9H8M2 597 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 CEP72Q9P209 647 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 SMG5Q9UPR3 1016 aaKnown RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 DNM3Q9UQ16 869 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 NUB1Q9Y5A7 615 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 ZFHX4Q86UP3 3567 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 PP2D1A8MPX8 630 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 TOB1P50616 345 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 PTGDRQ13258 359 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 CTXN3Q4LDR2 81 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 RINT1Q6NUQ1 792 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 VITQ6UXI7 678 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 PDZD4Q76G19 769 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 MAP4K3Q8IVH8 894 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
TRA2B-206ENST00000456380 LLPHQ9BRT6 129 aaKnown RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 ZNF334Q9HCZ1 680 aaPredicted RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 RBM19Q9Y4C8 960 aaKnown RBP13.56□□□□□ -0.24
TRA2B-206ENST00000456380 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 SLC16A4O15374 487 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 SEC24BO95487 1268 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
TRA2B-206ENST00000456380 TDGF1P13385 188 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 TGM1P22735 817 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 CDC25AP30304 524 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 VIPR2P41587 438 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 TWF1Q12792 350 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 IL17AQ16552 155 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 C1orf186Q6ZWK4 172 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 TMEM130Q8N3G9 435 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 DDX12PQ92771 950 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 CHRDQ9H2X0 955 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 AFF4Q9UHB7 1163 aaKnown RBP13.55□□□□□ -0.24
TRA2B-206ENST00000456380 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
TRA2B-206ENST00000456380 ACACBO00763 2458 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 NCANO14594 1321 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 GJA1P17302 382 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 PSMC3P17980 439 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.241e-15■□□□□ 8.6
TRA2B-206ENST00000456380 GDI1P31150 447 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 MCM4P33991 863 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 GNL2Q13823 731 aaKnown RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 IQCEQ6IPM2 695 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 IRF7Q92985 503 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 DRC1Q96MC2 740 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 NTPCRQ9BSD7 190 aaKnown RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 MMTAG2Q9BU76 263 aaKnown RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 C17orf75Q9HAS0 396 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 TRPV5Q9NQA5 729 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 NOL7Q9UMY1 257 aaKnown RBP13.54□□□□□ -0.24
TRA2B-206ENST00000456380 LAMA1P25391 3075 aa13.54□□□□□ -0.24
TRA2B-206ENST00000456380 ATXN1P54253 815 aaKnown RBP13.53□□□□□ -0.24
TRA2B-206ENST00000456380 EPHA5P54756 1037 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 ELMOD1Q8N336 334 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 FAM3CQ92520 227 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 SECISBP2LQ93073 1101 aaKnown RBP13.53□□□□□ -0.24
TRA2B-206ENST00000456380 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 LMAN1LQ9HAT1 526 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 TRPV4Q9HBA0 871 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 MAFFQ9ULX9 164 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 PIAS3Q9Y6X2 628 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 CACNA1BQ00975 2339 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 TOM1L1O75674 476 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 VNN2O95498 520 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 MYL4P12829 197 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
TRA2B-206ENST00000456380 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRA2B-206ENST00000456380 MFSD6LQ8IWD5 586 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 ZSCAN18Q8TBC5 510 aaPredicted RBP13.53□□□□□ -0.24
TRA2B-206ENST00000456380 DEPDC1BQ8WUY9 529 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 HAPLN2Q9GZV7 340 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 PARD6AQ9NPB6 346 aa13.53□□□□□ -0.24
TRA2B-206ENST00000456380 ASAH2Q9NR71 780 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms