RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 C4BPAP04003 597 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 SOD2P04179 222 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 DLATP10515 647 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 VAMP7P51809 220 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 TFAMQ00059 246 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 STX1AQ16623 288 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 TAS1R1Q7RTX1 841 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 CSGALNACT2Q8N6G5 542 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 HASPINQ8TF76 798 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 MRPL38Q96DV4 380 aaKnown RBP20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 ANO10Q9NW15 660 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 ITGA11Q9UKX5 1188 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 MTCH2Q9Y6C9 303 aa20.15■□□□□ 0.82
SBDSP1-205ENST00000456312 IKBKBO14920 756 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 SPTLC1O15269 473 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 BRCC3P46736 316 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 PPP3CAQ08209 521 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 DUOXA2Q1HG44 320 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 TDRD10Q5VZ19 366 aaKnown RBP20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 SASS6Q6UVJ0 657 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 TRAPPC11Q7Z392 1133 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 CACTINQ8WUQ7 758 aaKnown RBP20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 FNBP1Q96RU3 617 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 TLR9Q9NR96 1032 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 DACH1Q9UI36 760 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 IRAK3Q9Y616 596 aa20.14■□□□□ 0.81
SBDSP1-205ENST00000456312 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.819e-6■■■■■ 68.9
SBDSP1-205ENST00000456312 ITGB3P05106 788 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 TRIM49P0CI25 452 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 TRIM49CP0CI26 452 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 CTSAP10619 480 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 EPB41P11171 864 aaKnown RBP20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 FGFR3P22607 806 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 LILRA4P59901 499 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 KRT17Q04695 432 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 ZACNQ401N2 412 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 TIGD5Q53EQ6 642 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 FRMD5Q7Z6J6 570 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 GPR65Q8IYL9 337 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 VPS52Q8N1B4 723 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 SLC35C1Q96A29 364 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 ANKRD36BP1Q96IX9 119 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 SUSD3Q96L08 255 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 SRRTQ9BXP5 876 aaKnown RBP20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 STK39Q9UEW8 545 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 PCDHGC5Q9Y5F6 944 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 PTPRDP23468 1912 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 COL6A3P12111 3177 aa20.13■□□□□ 0.81
SBDSP1-205ENST00000456312 SYCE3A1L190 88 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 M0QZQ0 153 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 TADA2AO75478 443 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 LETM1O95202 739 aaPredicted RBP20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 VNN1O95497 513 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 CST3P01034 146 aaPredicted RBP20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 TNNI1P19237 187 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 POLR2BP30876 1174 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 AP3M2P53677 418 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 DSG1Q02413 1049 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 KIAA0319Q5VV43 1072 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 SV2AQ7L0J3 742 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 TRIM59Q8IWR1 403 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 LRRC52Q8N7C0 313 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 ENOX1Q8TC92 643 aaKnown RBP20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 DNAJC25Q9H1X3 360 aa20.12■□□□□ 0.81
SBDSP1-205ENST00000456312 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 I3L4J1 428 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 NCAPHQ15003 741 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 PTPN14Q15678 1187 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 RTP2Q5QGT7 225 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 PDE12Q6L8Q7 609 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 TCF25Q9BQ70 676 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 XYLT2Q9H1B5 865 aa20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 METTL14Q9HCE5 456 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 ARMCX3Q9UH62 379 aaPredicted RBP20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 PUF60Q9UHX1 559 aaKnown RBP20.11■□□□□ 0.81
SBDSP1-205ENST00000456312 STAU1O95793 577 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 TNNC2P02585 160 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 KRT13P13646 458 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 PAX3P23760 479 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 GTF2H1P32780 548 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 ELAVL2Q12926 359 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 MRPL58Q14197 206 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 PTPROQ16827 1216 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 LIMS2Q7Z4I7 341 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 ADGRD2Q7Z7M1 963 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 B3GALT6Q96L58 329 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 BPIFA3Q9BQP9 254 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 HSD3B7Q9H2F3 369 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 VRTNQ9H8Y1 702 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 NGRNQ9NPE2 291 aaKnown RBP20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 AGAP1Q9UPQ3 857 aa20.1■□□□□ 0.81
SBDSP1-205ENST00000456312 C2orf71A6NGG8 1288 aa20.09■□□□□ 0.81
SBDSP1-205ENST00000456312 HIDE1A8MVS5 230 aa20.09■□□□□ 0.81
SBDSP1-205ENST00000456312 SYN3O14994 580 aa20.09■□□□□ 0.81
SBDSP1-205ENST00000456312 TBC1D4O60343 1298 aa20.09■□□□□ 0.81
SBDSP1-205ENST00000456312 GNA14O95837 355 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms