RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CCDC162PA2VCL2 907 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 MBD4O95243 580 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SLC18A3Q16572 532 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 C6orf52Q5T4I8 152 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TRMT2AQ8IZ69 625 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 XXYLT1Q8NBI6 393 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SYMPKQ92797 1274 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 LRRC39Q96DD0 335 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF518BQ9C0D4 1074 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 RRN3Q9NYV6 651 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 GGA1Q9UJY5 639 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SNX9Q9Y5X1 595 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 DICER1Q9UPY3 1922 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PLK4O00444 970 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 FCHO2Q0JRZ9 810 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 XKRXQ6PP77 449 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SAMD1Q6SPF0 538 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ANKRD13CQ8N6S4 541 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 HSPH1Q92598 858 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 Q96MT0 163 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TARBP1Q13395 1621 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 A0A1B0GTH6 734 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 POTECB2RU33 542 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 IRS4O14654 1257 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 HIBADHP31937 336 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 MEI1Q5TIA1 1274 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 IRGCQ6NXR0 463 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ARMCX5Q6P1M9 558 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PABPC3Q9H361 631 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ACAD9Q9H845 621 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 HHATLQ9HCP6 504 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 GUCY1B2O75343 617 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 LCA5LO95447 670 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 STAT3P40763 770 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CSE1LP55060 971 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ENPEPQ07075 957 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CLEC4GQ6UXB4 293 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CAMK1DQ8IU85 385 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SLC35F6Q8N357 371 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 DNAJC7Q99615 494 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 KLHL4Q9C0H6 718 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 FARP1Q9Y4F1 1045 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF608Q9ULD9 1512 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 HEATR5BQ9P2D3 2071 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TEX46H3BTG2 121 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 H7C0C1 242 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CCDC130P13994 396 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ATP5OP48047 213 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 RPL26P61254 145 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TOP3AQ13472 1001 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 USH1GQ495M9 461 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF394Q53GI3 561 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 NLRP10Q86W26 655 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 JARID2Q92833 1246 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 RIT1Q92963 219 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF184Q99676 751 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 NOL6Q9H6R4 1146 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 VCPKMTQ9H867 229 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 RSAD1Q9HA92 442 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 AKAP11Q9UKA4 1901 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PLS3P13797 630 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PGM1P36871 562 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ACADSBP45954 432 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 TMED2Q15363 201 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ME3Q16798 604 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZMYM1Q5SVZ6 1142 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 DNAAF5Q86Y56 855 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PPM1KQ8N3J5 372 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SLC20A1Q8WUM9 679 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ISCUQ9H1K1 167 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SHOC2Q9UQ13 582 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 NCOA3Q9Y6Q9 1424 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 DDHD2O94830 711 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 RPSAP08865 295 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 SPRP35270 261 aaPredicted RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 PTPN12Q05209 780 aaKnown RBP5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CDC73Q6P1J9 531 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 COPS6Q7L5N1 327 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CDYLQ9Y232 598 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ZNF451Q9Y4E5 1061 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 STON1Q9Y6Q2 735 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 ACEP12821 1306 aa5.46□□□□□ -1.54
CSMD3-204ENST00000455883 CYP2C8P10632 490 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 UQCRBP14927 111 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 POLGP54098 1239 aaPredicted RBP5.45□□□□□ -1.54
CSMD3-204ENST00000455883 RAD23BP54727 409 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TUBA1BP68363 451 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 CEP78Q5JTW2 689 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 C6orf10Q5SRN2 563 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 TUBA1AQ71U36 451 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 ERO1BQ86YB8 467 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 HELQQ8TDG4 1101 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 C9orf16Q9BUW7 83 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 IMPAD1Q9NX62 359 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PAK5Q9P286 719 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 MROH1Q8NDA8 1641 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PIK3CDO00329 1044 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 PSMC3P17980 439 aa5.45□□□□□ -1.54
CSMD3-204ENST00000455883 SERPINB5P36952 375 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms