RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ANKFY1Q9P2R3 1169 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 GGA1Q9UJY5 639 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 R3HDM2Q9Y2K5 976 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 NEU2Q9Y3R4 380 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 MAGEA13PA6NCF6 341 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 P3H1Q32P28 736 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 UCMAQ8WVF2 138 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 SHC3Q92529 594 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 MCUR1Q96AQ8 359 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 HEMGNQ9BXL5 484 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 CADM1Q9BY67 442 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 PPCSQ9HAB8 311 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 DDX4Q9NQI0 724 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 GRID1Q9ULK0 1009 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.54□□□□□ -0.08
PTPRE-204ENST00000455661 FOCADQ5VW36 1801 aa14.54□□□□□ -0.08
PTPRE-204ENST00000455661 ARHGEF35A5YM69 484 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 SIGLEC16A6NMB1 481 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 C6orf229H3BNL8 230 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 PIK3CDO00329 1044 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 PLS3P13797 630 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 GCAP28676 217 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 PRELPP51888 382 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 SNAP25P60880 206 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 IKQ13123 557 aaPredicted RBP14.53□□□□□ -0.08
PTPRE-204ENST00000455661 PPP2R5CQ13362 524 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 SLC1A5Q15758 541 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 RFWD3Q6PCD5 774 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 LRRC74BQ6ZQY2 392 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 ZC3H18Q86VM9 953 aaKnown RBP14.53□□□□□ -0.08
PTPRE-204ENST00000455661 XXYLT1Q8NBI6 393 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 KREMEN1Q96MU8 473 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 STRA6Q9BX79 667 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 SYNCQ9H7C4 482 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 FAM196BA6NMK8 535 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 GYG2O15488 501 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 MAP3K13O43283 966 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 HAUS5O94927 633 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 RALAP11233 206 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 KCNA3P22001 575 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 HOXA13P31271 388 aaPredicted RBP14.53□□□□□ -0.08
PTPRE-204ENST00000455661 KCNQ4P56696 695 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 DYNC1I2Q13409 638 aaKnown RBP14.53□□□□□ -0.08
PTPRE-204ENST00000455661 ALCAMQ13740 583 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 PCNX4Q63HM2 1172 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 LVRNQ6Q4G3 990 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 BICD1Q96G01 975 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 ACCSQ96QU6 501 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 MIPEPQ99797 713 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 TMEM117Q9H0C3 514 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
PTPRE-204ENST00000455661 CAPN9O14815 690 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 PMM2O15305 246 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 MAP3K7O43318 606 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 KCNQ2O43526 872 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 EEF2P13639 858 aaKnown RBP14.52□□□□□ -0.08
PTPRE-204ENST00000455661 CACNA2D1P54289 1103 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 SLC5A9Q2M3M2 681 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 DDX27Q96GQ7 796 aaKnown RBP14.52□□□□□ -0.08
PTPRE-204ENST00000455661 NSL1Q96IY1 281 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 GBP5Q96PP8 586 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 HERPUD2Q9BSE4 406 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 PDP2Q9P2J9 529 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 SLC24A2Q9UI40 661 aa14.52□□□□□ -0.08
PTPRE-204ENST00000455661 COL24A1Q17RW2 1714 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 IGLV3-22A0A075B6J6 115 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 GSC2O15499 205 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 GAS7O60861 476 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 RPS6KA4O75676 772 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 PSMD10O75832 226 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 PSMG1O95456 288 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 CETN2P41208 172 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 AP1B1Q10567 949 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 PTP4A2Q12974 167 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 CUL3Q13618 768 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 KPNB1Q14974 876 aaKnown RBP14.52□□□□□ -0.09
PTPRE-204ENST00000455661 CLEC16AQ2KHT3 1053 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 CTC1Q2NKJ3 1217 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 C1orf220Q5T0J3 134 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 DSTYKQ6XUX3 929 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 C12orf56Q8IXR9 622 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 MKL1Q969V6 931 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 TRIM11Q96F44 468 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 FAM192AQ9GZU8 254 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.09
PTPRE-204ENST00000455661 LARSQ9P2J5 1176 aaKnown RBP14.52□□□□□ -0.09
PTPRE-204ENST00000455661 DCTN4Q9UJW0 460 aa14.52□□□□□ -0.09
PTPRE-204ENST00000455661 MYH11P35749 1972 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 CFAP69A5D8W1 941 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 F5H6K3 240 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 TYROBPO43914 113 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 KRT36O76013 467 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 BMP3P12645 472 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 KLRC2P26717 231 aa14.51□□□□□ -0.09
PTPRE-204ENST00000455661 KLF1Q13351 362 aaPredicted RBP14.51□□□□□ -0.09
PTPRE-204ENST00000455661 IFT43Q96FT9 208 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms