RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 F5P12259 2224 aa20.46■□□□□ 0.87
MSH6-206ENST00000455383 CCDC169A6NNP5 214 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 PRR5-ARHGAP8B1AHC4 643 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 ATXN1P54253 815 aaKnown RBP20.45■□□□□ 0.86
MSH6-206ENST00000455383 ARPP19P56211 112 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 ARHGAP8P85298 464 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 LMNB2Q03252 620 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 MAPK7Q13164 816 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 VITQ6UXI7 678 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 IGSF22Q8N9C0 903 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 SMARCD2Q92925 531 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 IRF7Q92985 503 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 C18orf25Q96B23 403 aaPredicted RBP20.45■□□□□ 0.86
MSH6-206ENST00000455383 TRPV4Q9HBA0 871 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 DDX19AQ9NUU7 478 aaKnown RBP20.45■□□□□ 0.86
MSH6-206ENST00000455383 CEP72Q9P209 647 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 STK24Q9Y6E0 443 aa20.45■□□□□ 0.86
MSH6-206ENST00000455383 PSMC3P17980 439 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 DMP1Q13316 513 aaPredicted RBP20.44■□□□□ 0.86
MSH6-206ENST00000455383 CTXN3Q4LDR2 81 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 CYP4A22Q5TCH4 519 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 MPZL3Q6UWV2 235 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 HS6ST3Q8IZP7 471 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 LEMD2Q8NC56 503 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 FBXO18Q8NFZ0 1043 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 DEPDC1BQ8WUY9 529 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 DDX12PQ92771 950 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 NDRG2Q9UN36 371 aaKnown RBP20.44■□□□□ 0.86
MSH6-206ENST00000455383 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
MSH6-206ENST00000455383 NUB1Q9Y5A7 615 aa20.44■□□□□ 0.86
MSH6-206ENST00000455383 E9PMD0 336 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 ARNTLO00327 626 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 HIP1RO75146 1068 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 MLLT6P55198 1093 aaPredicted RBP20.43■□□□□ 0.86
MSH6-206ENST00000455383 ZNF280DQ6N043 979 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 C1orf186Q6ZWK4 172 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 BEST2Q8NFU1 509 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 SNX29Q8TEQ0 813 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 FAM3CQ92520 227 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 ZNF512Q96ME7 567 aaPredicted RBP20.43■□□□□ 0.86
MSH6-206ENST00000455383 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
MSH6-206ENST00000455383 NTPCRQ9BSD7 190 aaKnown RBP20.43■□□□□ 0.86
MSH6-206ENST00000455383 C17orf75Q9HAS0 396 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 PARD6AQ9NPB6 346 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 NCANO14594 1321 aa20.43■□□□□ 0.86
MSH6-206ENST00000455383 GDI1P31150 447 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 NRLP54845 237 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 TWF1Q12792 350 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 NBR1Q14596 966 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 SLC10A6Q3KNW5 377 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 IQCEQ6IPM2 695 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 RINT1Q6NUQ1 792 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 ELMOD1Q8N336 334 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 APPL2Q8NEU8 664 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 ZBTB45Q96K62 511 aaPredicted RBP20.42■□□□□ 0.86
MSH6-206ENST00000455383 DRC1Q96MC2 740 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 RUSC1Q9BVN2 902 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 LMAN1LQ9HAT1 526 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 PCDHB8Q9UN66 801 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 DNM3Q9UQ16 869 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 CITO14578 2027 aa20.42■□□□□ 0.86
MSH6-206ENST00000455383 CHRNB1P11230 501 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 MCM4P33991 863 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 VIPR2P41587 438 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 TOB1P50616 345 aaPredicted RBP20.41■□□□□ 0.86
MSH6-206ENST00000455383 CCR3P51677 355 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 RNF19BQ6ZMZ0 732 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 MFSD6LQ8IWD5 586 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 CELF5Q8N6W0 485 aaKnown RBP20.41■□□□□ 0.86
MSH6-206ENST00000455383 ZSCAN18Q8TBC5 510 aaPredicted RBP20.41■□□□□ 0.86
MSH6-206ENST00000455383 RTKNQ9BST9 563 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 TCHPQ9BT92 498 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 LRRC3Q9BY71 257 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 GMEB2Q9UKD1 530 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 LIMCH1Q9UPQ0 1083 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 PIAS3Q9Y6X2 628 aa20.41■□□□□ 0.86
MSH6-206ENST00000455383 PDCD11Q14690 1871 aaKnown RBP20.41■□□□□ 0.86
MSH6-206ENST00000455383 M0QZQ0 153 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 TOM1L1O75674 476 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 OAZ2O95190 189 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 VNN2O95498 520 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 GJA1P17302 382 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 PTGDRQ13258 359 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 TICRRQ7Z2Z1 1910 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 KCNK18Q7Z418 384 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 SPIRE2Q8WWL2 714 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 MMTAG2Q9BU76 263 aaKnown RBP20.4■□□□□ 0.86
MSH6-206ENST00000455383 TIPINQ9BVW5 301 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 RAB34Q9BZG1 259 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 GPR88Q9GZN0 384 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 ASAH2Q9NR71 780 aa20.4■□□□□ 0.86
MSH6-206ENST00000455383 CDV3Q9UKY7 258 aaKnown RBP20.4■□□□□ 0.86
MSH6-206ENST00000455383 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
MSH6-206ENST00000455383 PP2D1A8MPX8 630 aa20.39■□□□□ 0.85
MSH6-206ENST00000455383 ZNF263O14978 683 aa20.39■□□□□ 0.85
MSH6-206ENST00000455383 SLC16A4O15374 487 aa20.39■□□□□ 0.85
MSH6-206ENST00000455383 MYL4P12829 197 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms