RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PCMTD1Q96MG8 357 aaPredicted RBP17.92■□□□□ 0.46
LINC00963-208ENST00000454968 KREMEN1Q96MU8 473 aa17.92■□□□□ 0.46
LINC00963-208ENST00000454968 RPS6KC1Q96S38 1066 aa17.92■□□□□ 0.46
LINC00963-208ENST00000454968 PI4K2AQ9BTU6 479 aa17.92■□□□□ 0.46
LINC00963-208ENST00000454968 STK33Q9BYT3 514 aa17.92■□□□□ 0.46
LINC00963-208ENST00000454968 NUCKS1Q9H1E3 243 aaKnown RBP17.92■□□□□ 0.46
LINC00963-208ENST00000454968 FAM124BQ9H5Z6 455 aaPredicted RBP17.92■□□□□ 0.46
LINC00963-208ENST00000454968 NUB1Q9Y5A7 615 aa17.92■□□□□ 0.46
LINC00963-208ENST00000454968 HOXA2O43364 376 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 PHACTR2O75167 634 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 POLR2BP30876 1174 aaKnown RBP17.91■□□□□ 0.46
LINC00963-208ENST00000454968 KRT9P35527 623 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 GJB7Q6PEY0 223 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00963-208ENST00000454968 LIMS2Q7Z4I7 341 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 C7orf61Q8IZ16 206 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 TMEM130Q8N3G9 435 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 UBR7Q8N806 425 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 SHC3Q92529 594 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 BADQ92934 168 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 TATDN2Q93075 761 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 TOP1MTQ969P6 601 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 CASD1Q96PB1 797 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 RC3H2Q9HBD1 1191 aaKnown RBP17.91■□□□□ 0.46
LINC00963-208ENST00000454968 ABHD10Q9NUJ1 306 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 AIPL1Q9NZN9 384 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 KANSL3Q9P2N6 904 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 PRKAG2Q9UGJ0 569 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 DNAJC12Q9UKB3 198 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 CNTN6Q9UQ52 1028 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 PCDHB7Q9Y5E2 793 aa17.91■□□□□ 0.46
LINC00963-208ENST00000454968 TPM1P09493 284 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 FGFR1P11362 822 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 RPL9P32969 192 aaKnown RBP17.9■□□□□ 0.46
LINC00963-208ENST00000454968 DEKP35659 375 aaKnown RBP17.9■□□□□ 0.46
LINC00963-208ENST00000454968 ADKP55263 362 aaKnown RBP17.9■□□□□ 0.46
LINC00963-208ENST00000454968 CDK17Q00537 523 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 FPGSQ05932 587 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 TUSC3Q13454 348 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 TRPC3Q13507 836 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 NOMO2Q5JPE7 1267 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 WDR44Q5JSH3 913 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 PDXDC1Q6P996 788 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 TMEM139Q8IV31 216 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 LRRC8AQ8IWT6 810 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 OR8K1Q8NGG5 319 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 BCO2Q9BYV7 579 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 IMPG2Q9BZV3 1241 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 AGAP1Q9UPQ3 857 aa17.9■□□□□ 0.46
LINC00963-208ENST00000454968 F8VZ95 297 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 PPEF2O14830 753 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 EVI5O60447 810 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 PAX3P23760 479 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 TBXAS1P24557 533 aaPredicted RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 PNPLA4P41247 253 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 ASPAP45381 313 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 AARSP49588 968 aaKnown RBP eCLIP17.89■□□□□ 0.462e-6■■■■■ 43.8
LINC00963-208ENST00000454968 WDR5P61964 334 aaKnown RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 CUL2Q13617 745 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 UPP1Q16831 310 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 ZNF699Q32M78 642 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 HS1BP3Q53T59 392 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 E4F1Q66K89 784 aaPredicted RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 SPOPLQ6IQ16 392 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 WDR59Q6PJI9 974 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 RNF169Q8NCN4 708 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 ZNF397Q8NF99 534 aaPredicted RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 KAT5Q92993 513 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 HPDLQ96IR7 371 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 UROC1Q96N76 676 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 NIF3L1Q9GZT8 377 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 UBE2TQ9NPD8 197 aaPredicted RBP17.89■□□□□ 0.46
LINC00963-208ENST00000454968 NLRC4Q9NPP4 1024 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 TBC1D13Q9NVG8 400 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 GDAP2Q9NXN4 497 aa17.89■□□□□ 0.46
LINC00963-208ENST00000454968 LRRC53A6NM62 1247 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 DGKIO75912 1065 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 EPHB4P54760 987 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 MFAP3P55082 362 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 DRAP1Q14919 205 aaPredicted RBP17.89■□□□□ 0.45
LINC00963-208ENST00000454968 CACNA2D4Q7Z3S7 1137 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 FAM71AQ8IYT1 594 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 PPM1KQ8N3J5 372 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 CPLX3Q8WVH0 158 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 ZNF689Q96CS4 500 aaPredicted RBP17.89■□□□□ 0.45
LINC00963-208ENST00000454968 DDX27Q96GQ7 796 aaKnown RBP17.89■□□□□ 0.45
LINC00963-208ENST00000454968 GOLGA2P5Q9HBQ8 144 aa17.89■□□□□ 0.45
LINC00963-208ENST00000454968 TSC2P49815 1807 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 LAMA2P24043 3122 aaKnown RBP17.88■□□□□ 0.45
LINC00963-208ENST00000454968 CEP290O15078 2479 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 TMEM189-UBE2V1I3L0A0 370 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 B4GALT3O60512 393 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 POMCP01189 267 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 KRT19P08727 400 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 ACRP10323 421 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 PRKCIP41743 596 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 GOLGA8FQ08AF8 430 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 GOLGA8DPQ0D2H9 430 aa17.88■□□□□ 0.45
LINC00963-208ENST00000454968 LRMPQ12912 555 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms