RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RHOT1Q8IXI2 618 aa13.34□□□□□ -0.27
ECHDC1-209ENST00000454591 BICD1Q96G01 975 aa13.34□□□□□ -0.27
ECHDC1-209ENST00000454591 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
ECHDC1-209ENST00000454591 CDC42EP4Q9H3Q1 356 aaKnown RBP13.34□□□□□ -0.27
ECHDC1-209ENST00000454591 AZI2Q9H6S1 392 aa13.34□□□□□ -0.27
ECHDC1-209ENST00000454591 PTPRFP10586 1907 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 NFKBIEO00221 500 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 TTC4O95801 387 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 ABHD2P08910 425 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 GLRA2P23416 452 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 PIK3CAP42336 1068 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 KCNJ1P48048 391 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 NLRP11P59045 1033 aaKnown RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 LMNB2Q03252 620 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 IFT88Q13099 833 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 STXBP2Q15833 593 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 ZPBP2Q6X784 338 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC121Q6ZUS5 278 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 ASAP3Q8TDY4 903 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 BBXQ8WY36 941 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 PI4K2AQ9BTU6 479 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 HAPLN2Q9GZV7 340 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 APOBEC3GQ9HC16 384 aaKnown RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 PICK1Q9NRD5 415 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 CHORDC1Q9UHD1 332 aaPredicted RBP13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 ACTL7BQ9Y614 415 aa13.33□□□□□ -0.28
ECHDC1-209ENST00000454591 TCRBV5S1A1TA0A578 114 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 FZD9O00144 591 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 NDC80O14777 642 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 LSM8O95777 96 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 GSTA1P08263 222 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 EDNRBP24530 442 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 POLGP54098 1239 aaPredicted RBP13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 COPS2P61201 443 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 MCL1Q07820 350 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CNGA2Q16280 664 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 BRSK2Q8IWQ3 736 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CCHCR1Q8TD31 782 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 IPO4Q8TEX9 1081 aaKnown RBP13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CCT6BQ92526 530 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CABS1Q96KC9 395 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 ZNF518BQ9C0D4 1074 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 ZNF302Q9NR11 478 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CHST7Q9NS84 486 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 CAPN7Q9Y6W3 813 aa13.32□□□□□ -0.28
ECHDC1-209ENST00000454591 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 K7ERI5 159 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 THAP12O43422 761 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 RASSF9O75901 435 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 TNNI1P19237 187 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 FGFR4P22455 802 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 HNRNPH1P31943 449 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 EFNA5P52803 228 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 WNT7BP56706 349 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 IFI35P80217 286 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 TAP1Q03518 808 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 SURF1Q15526 300 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC142Q17RM4 750 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 MTERF2Q49AM1 385 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 TBC1D10BQ4KMP7 808 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 ANKRD20A8PQ5CZ79 823 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 SWT1Q5T5J6 900 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CPLX4Q7Z7G2 160 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 WDR49Q8IV35 697 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC13Q8IYE1 715 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 RIBC1Q8N443 379 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC89Q8N998 374 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CCDC197Q8NCU1 140 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 DEPTORQ8TB45 409 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 CPA5Q8WXQ8 436 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 HERPUD2Q9BSE4 406 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 INTS9Q9NV88 658 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 EURLQ9NYK6 297 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 RBAKQ9NYW8 714 aaPredicted RBP13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 ADAM22Q9P0K1 906 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 IP6K2Q9UHH9 426 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
ECHDC1-209ENST00000454591 ADCY3O60266 1144 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 FAM189A1O60320 539 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 DNAJC8O75937 253 aaPredicted RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 ASS1P00966 412 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 ATF2P15336 505 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 MMP8P22894 467 aa13.3□□□□□ -0.28
ECHDC1-209ENST00000454591 KLRC2P26717 231 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms