RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 CPSF3Q9UKF6 684 aaKnown RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 UBQLN1Q9UMX0 589 aaKnown RBP17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZDBF2Q9HCK1 2354 aa17.89■□□□□ 0.45
NCKIPSD-208ENST00000454134 MYH15Q9Y2K3 1946 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 H7C4K7 107 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 PPEF2O14830 753 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 XYLBO75191 536 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 NFICP08651 508 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 IDEP14735 1019 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 ABCD1P33897 745 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 NHLH1Q02575 133 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 KCNA1Q09470 495 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 UVSSAQ2YD98 709 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 JADE1Q6IE81 842 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 SPRYD3Q8NCJ5 442 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZNF461Q8TAF7 563 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 ITFG1Q8TB96 612 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 PCDHB8Q9UN66 801 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 DUSP12Q9UNI6 340 aa17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 TIMM13Q9Y5L4 95 aaPredicted RBP17.88■□□□□ 0.45
NCKIPSD-208ENST00000454134 PRRG1O14668 218 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 SPTLC2O15270 562 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 PPP1R37O75864 691 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 ABLIM3O94929 683 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 ADRB2P07550 413 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 GAP43P17677 238 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 CYP3A5P20815 502 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 ELF1P32519 619 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 CASP5P51878 434 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 SLC44A3Q8N4M1 653 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 APPL2Q8NEU8 664 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZNF396Q96N95 335 aaPredicted RBP17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 STRA6Q9BX79 667 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 MFSD1Q9H3U5 465 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 DNMT3BQ9UBC3 853 aaKnown RBP17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 SEL1LQ9UBV2 794 aa17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 AGO2Q9UKV8 859 aaKnown RBP17.87■□□□□ 0.45
NCKIPSD-208ENST00000454134 XPOTO43592 962 aaKnown RBP17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 GCNT3O95395 438 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 SEC24AO95486 1093 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 CFHP08603 1231 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 HTR4Q13639 388 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 SPATA1Q5VX52 437 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 SLFN12LQ6IEE8 588 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZNF280DQ6N043 979 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 BEST2Q8NFU1 509 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 ING5Q8WYH8 240 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 FGF13Q92913 245 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 HVCN1Q96D96 273 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 FGFBP2Q9BYJ0 223 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 CYP4F11Q9HBI6 524 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 FBXL21Q9UKT6 434 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 CDH7Q9ULB5 785 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 STYXL1Q9Y6J8 313 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 NUMBLQ9Y6R0 609 aa17.86■□□□□ 0.45
NCKIPSD-208ENST00000454134 ANHXE9PGG2 379 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 M0QZQ0 153 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 TULP1O00294 542 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 PPP6R2O75170 966 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 POU2F2P09086 479 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZSCAN22P10073 491 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 ATF2P15336 505 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 ADSSP30520 456 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 AARSP49588 968 aaKnown RBP eCLIP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 YWHAHQ04917 246 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 PKP1Q13835 747 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 TMEM132DQ14C87 1099 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 PABPC1LQ4VXU2 614 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 CRELD2Q6UXH1 353 aaPredicted RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 DSTYKQ6XUX3 929 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 CD302Q8IX05 232 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 SIX5Q8N196 739 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 TMEM105Q8N8V8 129 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 FLCNQ8NFG4 579 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 NOTCH4Q99466 2003 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 RPP25Q9BUL9 199 aaKnown RBP17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
NCKIPSD-208ENST00000454134 ANK1P16157 1881 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 ARHGEF37A1IGU5 675 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 SPTLC1O15269 473 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 YEATS4O95619 227 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 LRG1P02750 347 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 RHOP08100 348 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 OR4Q2P0C623 313 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 CPB1P15086 417 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 ADCY1Q08828 1119 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 TCF15Q12870 199 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 L1TD1Q5T7N2 865 aaKnown RBP17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 C9orf57Q5W0N0 161 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 SHC4Q6S5L8 630 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 PARM1Q6UWI2 310 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 RNF19BQ6ZMZ0 732 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 RTL10Q7L3V2 364 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 TCEAL8Q8IYN2 117 aa17.84■□□□□ 0.45
NCKIPSD-208ENST00000454134 ZSWIM2Q8NEG5 633 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms