RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CGRRF1Q99675 332 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 TTYH3Q9C0H2 523 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 TMEM8AQ9HCN3 771 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 ST3GAL5Q9UNP4 418 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 SIK3Q9Y2K2 1263 aa17.03■□□□□ 0.32
SNX17-204ENST00000453453 CITO14578 2027 aa17.02■□□□□ 0.32
SNX17-204ENST00000453453 RNF225M0QZC1 329 aaPredicted RBP17.02■□□□□ 0.31
SNX17-204ENST00000453453 PHACTR2O75167 634 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 TNFSF9P41273 254 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 GRM5P41594 1212 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 GCLMP48507 274 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 ATN1P54259 1190 aaPredicted RBP17.02■□□□□ 0.31
SNX17-204ENST00000453453 NFX1Q12986 1120 aaKnown RBP17.02■□□□□ 0.31
SNX17-204ENST00000453453 KRT39Q6A163 491 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 TWF2Q6IBS0 349 aaKnown RBP17.02■□□□□ 0.31
SNX17-204ENST00000453453 WDR59Q6PJI9 974 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 TRIM58Q8NG06 486 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 PLEKHO2Q8TD55 490 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 CAVIN3Q969G5 261 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 FAM212AQ96EL1 285 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 ACAP3Q96P50 834 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 LSM14BQ9BX40 385 aaKnown RBP17.02■□□□□ 0.31
SNX17-204ENST00000453453 GCNT4Q9P109 453 aa17.02■□□□□ 0.31
SNX17-204ENST00000453453 ANK1P16157 1881 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 AGPSO00116 658 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 PMM2O15305 246 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNX17-204ENST00000453453 ABL1P00519 1130 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 CD4P01730 458 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 GHRP10912 638 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 COL6A1P12109 1028 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 SELPP16109 830 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 GGCXP38435 758 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
SNX17-204ENST00000453453 IRAK1P51617 712 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 VAV2P52735 878 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 YARSP54577 528 aaKnown RBP17.01■□□□□ 0.31
SNX17-204ENST00000453453 EPHB4P54760 987 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 GLE1Q53GS7 698 aaKnown RBP17.01■□□□□ 0.31
SNX17-204ENST00000453453 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 B4GALNT4Q76KP1 1039 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 ANKRD33Q7Z3H0 272 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 C1orf131Q8NDD1 294 aaKnown RBP17.01■□□□□ 0.31
SNX17-204ENST00000453453 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
SNX17-204ENST00000453453 TCP1P17987 556 aaKnown RBP17■□□□□ 0.31
SNX17-204ENST00000453453 CD52P31358 61 aa17■□□□□ 0.31
SNX17-204ENST00000453453 HNRNPH3P31942 346 aaKnown RBP17■□□□□ 0.31
SNX17-204ENST00000453453 CLDN10P78369 228 aa17■□□□□ 0.31
SNX17-204ENST00000453453 LPIN1Q14693 890 aa17■□□□□ 0.31
SNX17-204ENST00000453453 ENOX2Q16206 610 aaKnown RBP17■□□□□ 0.31
SNX17-204ENST00000453453 CBWD6Q4V339 395 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CBWD3Q5JTY5 395 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CBWD5Q5RIA9 395 aa17■□□□□ 0.31
SNX17-204ENST00000453453 C1orf220Q5T0J3 134 aa17■□□□□ 0.31
SNX17-204ENST00000453453 LRRC8DQ7L1W4 858 aa17■□□□□ 0.31
SNX17-204ENST00000453453 WDR49Q8IV35 697 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CD302Q8IX05 232 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CEP120Q8N960 986 aa17■□□□□ 0.31
SNX17-204ENST00000453453 TOX2Q96NM4 488 aa17■□□□□ 0.31
SNX17-204ENST00000453453 NCAPGQ9BPX3 1015 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CAPS2Q9BXY5 557 aa17■□□□□ 0.31
SNX17-204ENST00000453453 TMEM117Q9H0C3 514 aa17■□□□□ 0.31
SNX17-204ENST00000453453 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
SNX17-204ENST00000453453 PADI3Q9ULW8 664 aa17■□□□□ 0.31
SNX17-204ENST00000453453 CENPFP49454 3210 aa17■□□□□ 0.31
SNX17-204ENST00000453453 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 TACC1O75410 805 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 CXCL8P10145 99 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 KLK7P49862 253 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 KCNMA1Q12791 1236 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 EMC10Q5UCC4 262 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 DIS3LQ8TF46 1054 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 POP1Q99575 1024 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 TACO1Q9BSH4 297 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 EIF2AQ9BY44 585 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 EDEM3Q9BZQ6 932 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 ERVK-5Q9HDB9 667 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 PLCB1Q9NQ66 1216 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 RNF14Q9UBS8 474 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 GGA2Q9UJY4 613 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 SNX12Q9UMY4 172 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 DAAM1Q9Y4D1 1078 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 TNNC2P02585 160 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 PON1P27169 355 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 BIRC3Q13489 604 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 TRIM60Q495X7 471 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 FBXL13Q8NEE6 735 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
SNX17-204ENST00000453453 MYCBPQ99417 103 aaPredicted RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
SNX17-204ENST00000453453 ASB7Q9H672 318 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms