RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 HPS4Q9NQG7 708 aa8.17□□□□□ -1.1
RIF1-206ENST00000453091 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
RIF1-206ENST00000453091 A0A1W2PQJ5 194 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 MEI4A8MW99 385 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 DFFAO00273 331 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 GTF2H1P32780 548 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 GCLCP48506 637 aaPredicted RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 ANGEL2Q5VTE6 544 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 HEATR6Q6AI08 1181 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 LRRN4Q8WUT4 740 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PRMT6Q96LA8 375 aaPredicted RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 LRFN2Q9ULH4 789 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ZBTB39O15060 712 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.11e-7■□□□□ 8.5
RIF1-206ENST00000453091 SYF2O95926 243 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 RCAN1P53805 252 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 WDR72Q3MJ13 1102 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 CBWD2Q8IUF1 395 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 SPC25Q9HBM1 224 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 WNT7AO00755 349 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 RAP1GAPP47736 663 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 NME5P56597 212 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PLIN5Q00G26 463 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PPATQ06203 517 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 AMHR2Q16671 573 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 TAF1BQ53T94 588 aaPredicted RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 GRAMD4Q6IC98 578 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 SP8Q8IXZ3 490 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 KIAA0895Q8NCT3 520 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PIAS1O75925 651 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 HLA-DRAP01903 254 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 GYS1P13807 737 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ACAD11Q709F0 780 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 KCNK18Q7Z418 384 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 ERGIC2Q96RQ1 377 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 DUSP9Q99956 384 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 TRIM33Q9UPN9 1127 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 NCAPD2Q15021 1401 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 DDTLA6NHG4 134 aaPredicted RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 FAM47DPA6NHR8 397 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 A8MXQ7 604 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ASNSP08243 561 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PDIA5Q14554 519 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ARHGEF19Q8IW93 802 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ATG4CQ96DT6 458 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 CNBD2Q96M20 576 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 OSBPL8Q9BZF1 889 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ACP6Q9NPH0 428 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 SLC16A3O15427 465 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 ADCY3O60266 1144 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 LGR5O75473 907 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 APRTP07741 180 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 TFDP2Q14188 446 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 C3orf62Q6ZUJ4 267 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ABI1Q8IZP0 508 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 HEY2Q9UBP5 337 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 CNOT7Q9UIV1 285 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 NAGPAQ9UK23 515 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PDGFRBP09619 1106 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 IREB2P48200 963 aaKnown RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 JAK3P52333 1124 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 WDR93Q6P2C0 686 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 SLC13A5Q86YT5 568 aaPredicted RBP8.16□□□□□ -1.1
RIF1-206ENST00000453091 ZFPM1Q8IX07 1006 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ARHGEF26Q96DR7 871 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 TTC25Q96NG3 672 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 MMP19Q99542 508 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 ZSWIM1Q9BR11 485 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 KCNG1Q9UIX4 513 aa8.16□□□□□ -1.1
RIF1-206ENST00000453091 UBA6A0AVT1 1052 aaPredicted RBP8.15□□□□□ -1.1
RIF1-206ENST00000453091 MSH4O15457 936 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 CST8O60676 142 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 ITIH2P19823 946 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 BGNP21810 368 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 STX3Q13277 289 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 CDC42EP4Q9H3Q1 356 aaKnown RBP8.15□□□□□ -1.1
RIF1-206ENST00000453091 PARVAQ9NVD7 372 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 IQGAP3Q86VI3 1631 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 E2F6O75461 281 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 CALB1P05937 261 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 HNRNPCP07910 306 aaKnown RBP eCLIP8.15□□□□□ -1.15e-6■■■□□ 16.4
RIF1-206ENST00000453091 SULT1E1P49888 294 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 RCN1Q15293 331 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 FAM117BQ6P1L5 589 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 MTDHQ86UE4 582 aaKnown RBP8.15□□□□□ -1.1
RIF1-206ENST00000453091 ATP8B4Q8TF62 1192 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 TEKT4Q8WW24 435 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 CBWD1Q9BRT8 395 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 ZC3H7BQ9UGR2 993 aaKnown RBP8.15□□□□□ -1.1
RIF1-206ENST00000453091 TPST1O60507 370 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 ATP5HO75947 161 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 SHBGP04278 402 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 RARBP10826 455 aa8.15□□□□□ -1.1
RIF1-206ENST00000453091 CAV1Q03135 178 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms