RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.98■■□□□ 1.75
CPSF4-207ENST00000451876 TMEM189-UBE2V1I3L0A0 370 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 RFXAPO00287 272 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 PIRO00625 290 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 IKBKBO14920 756 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 C4BPAP04003 597 aaKnown RBP25.97■■□□□ 1.75
CPSF4-207ENST00000451876 GCLMP48507 274 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 FXR1P51114 621 aaKnown RBP eCLIP25.97■■□□□ 1.75
CPSF4-207ENST00000451876 ZNF697Q5TEC3 545 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 DCLRE1AQ6PJP8 1040 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 LRSAM1Q6UWE0 723 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 CREBRFQ8IUR6 639 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 TRIM59Q8IWR1 403 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 FAM161BQ96MY7 647 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 C11orf84Q9BUA3 381 aaPredicted RBP25.97■■□□□ 1.75
CPSF4-207ENST00000451876 COLEC11Q9BWP8 271 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 FANCLQ9NW38 375 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 ITGA11Q9UKX5 1188 aa25.97■■□□□ 1.75
CPSF4-207ENST00000451876 H3BNC9 293 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 KRT19P08727 400 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 C15orf39Q6ZRI6 1047 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 SV2AQ7L0J3 742 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 GPR62Q9BZJ7 368 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 HSD3B7Q9H2F3 369 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 REV3LO60673 3130 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 TSC2P49815 1807 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 EFEMP2O95967 443 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 DNAJB1P25685 340 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 BRCC3P46736 316 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 PLCB3Q01970 1234 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 GRIN2CQ14957 1233 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 ZACNQ401N2 412 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 CDKAL1Q5VV42 579 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 AGAP1Q9UPQ3 857 aa25.96■■□□□ 1.75
CPSF4-207ENST00000451876 CARNS1A5YM72 827 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 I3L4J1 428 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 GRM6O15303 877 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 TADA2AO75478 443 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 CST3P01034 146 aaPredicted RBP25.95■■□□□ 1.74
CPSF4-207ENST00000451876 AP3M2P53677 418 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 BIRC3Q13489 604 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 GPM6BQ13491 265 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 IQCB1Q15051 598 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 CBWD6Q4V339 395 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 CBWD3Q5JTY5 395 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 CBWD5Q5RIA9 395 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 SPPL3Q8TCT6 385 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 CBX8Q9HC52 389 aa25.95■■□□□ 1.74
CPSF4-207ENST00000451876 SPTLC1O15269 473 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 LPXNO60711 386 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 CSPG5O95196 566 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 VNN1O95497 513 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 ZNF445P59923 1031 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 FUT10Q6P4F1 479 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 Q7L0L9 218 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 RNF168Q8IYW5 571 aaPredicted RBP25.94■■□□□ 1.74
CPSF4-207ENST00000451876 PRDM12Q9H4Q4 367 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 TMEM8AQ9HCN3 771 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 NUB1Q9Y5A7 615 aa25.94■■□□□ 1.74
CPSF4-207ENST00000451876 EYSQ5T1H1 3165 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 KCNJ18B7U540 433 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 LILRA4P59901 499 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 CAMK1Q14012 370 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 KCNJ12Q14500 433 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 TAS1R1Q7RTX1 841 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 FAM114A1Q8IWE2 563 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 B3GALT6Q96L58 329 aa25.93■■□□□ 1.74
CPSF4-207ENST00000451876 SF3B1O75533 1304 aaKnown RBP eCLIP25.93■■□□□ 1.742e-6■■■■■ 80.4
CPSF4-207ENST00000451876 MXI1P50539 228 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 KRT17Q04695 432 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 TIGD5Q53EQ6 642 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 DDX53Q86TM3 631 aaKnown RBP25.92■■□□□ 1.74
CPSF4-207ENST00000451876 LUZP1Q86V48 1076 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 POF1BQ8WVV4 589 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 ELMO3Q96BJ8 720 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 TSPY26PQ9H489 355 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.92■■□□□ 1.74
CPSF4-207ENST00000451876 PHACTR2O75167 634 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 LRRN2O75325 713 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 GTF2H1P32780 548 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 MTIF2P46199 727 aaKnown RBP25.92■■□□□ 1.74
CPSF4-207ENST00000451876 AARSP49588 968 aaKnown RBP eCLIP25.92■■□□□ 1.742e-6■■■■■ 40.7
CPSF4-207ENST00000451876 RBP5P82980 135 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 NCOA4Q13772 614 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 TCP11X2Q5H9J9 407 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 KRT39Q6A163 491 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 GPR153Q6NV75 609 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 TAS1R2Q8TE23 839 aa25.92■■□□□ 1.74
CPSF4-207ENST00000451876 MAGEC2Q9UBF1 373 aaPredicted RBP25.92■■□□□ 1.74
CPSF4-207ENST00000451876 MYO7AQ13402 2215 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 ZNF18P17022 549 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 FMO5P49326 533 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 TAF6P49848 677 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 MYL6P60660 151 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 KCNH2Q12809 1159 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 VPS52Q8N1B4 723 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 LRRC52Q8N7C0 313 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 ZNF560Q96MR9 790 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 LZTS1Q9Y250 596 aa25.91■■□□□ 1.74
CPSF4-207ENST00000451876 STX10O60499 249 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms