RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 NF2P35240 595 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 MXD4Q14582 209 aaPredicted RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 FAM153CQ494X1 144 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 FAM160B1Q5W0V3 765 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 KIAA1328Q86T90 577 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 PCMTD1Q96MG8 357 aaPredicted RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 FAM153AQ9UHL3 310 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 GABRQQ9UN88 632 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 EXOC7Q9UPT5 735 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ALPK3Q96L96 1907 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 H0YGN5 161 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 K7ERI5 159 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 GH1P01241 217 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 CTNNA2P26232 953 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 CTNNA1P35221 906 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 MYL6P60660 151 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ADCY2Q08462 1091 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ZNF484Q5JVG2 852 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 RHPN2Q8IUC4 686 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 CEP112Q8N8E3 955 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 TRIB2Q92519 343 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 KHSRPQ92945 711 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP46-202ENST00000451218 CAPZA3Q96KX2 299 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 NOX5Q96PH1 765 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 EIF2AQ9BY44 585 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 NFS1Q9Y697 457 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 OGTO15294 1046 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ADAMTS4O75173 837 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 PPFIA4O75335 1185 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 GRIK4Q16099 956 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 CYP1B1Q16678 543 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 PTPROQ16827 1216 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 C2CD6Q53TS8 623 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 TDRD12Q587J7 1177 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 CCNI2Q6ZMN8 369 aaPredicted RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 MCOLN2Q8IZK6 566 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 U2AF1L4Q8WU68 220 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 ZNHIT6Q9NWK9 470 aaKnown RBP7.08□□□□□ -1.28
USP46-202ENST00000451218 POLIQ9UNA4 740 aa7.08□□□□□ -1.28
USP46-202ENST00000451218 H3BRB1 525 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 RTN2O75298 545 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 FTLP02792 175 aaPredicted RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 DLATP10515 647 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 MAPK4P31152 587 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 FLT3P36888 993 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 UAP1Q16222 522 aaPredicted RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 LONRF2Q1L5Z9 754 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 PLEKHA7Q6IQ23 1121 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ACAD10Q6JQN1 1059 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 CD300LGQ6UXG3 332 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 PARK7Q99497 189 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 MSTO1Q9BUK6 570 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ABHD16BQ9H3Z7 469 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 TUT1Q9H6E5 874 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 CALCOCO1Q9P1Z2 691 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 LACTBL1A8MY62 500 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ZMYND10O75800 440 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 STAU1O95793 577 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 SMIM10L2AP0DMW4 78 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 SMIM10L2BP0DMW5 78 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 FGFR4P22455 802 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 RPL34P49207 117 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 AARSP49588 968 aaKnown RBP eCLIP7.07□□□□□ -1.28
USP46-202ENST00000451218 LIG4P49917 911 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 EFNA5P52803 228 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 RAD23BP54727 409 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 NOP14P78316 857 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 INCA1Q0VD86 236 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ATF7IP2Q5U623 682 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 JADE1Q6IE81 842 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 PHF13Q86YI8 300 aaPredicted RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 SH3GL2Q99962 352 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 MFRPQ9BY79 579 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 KIAA1586Q9HCI6 787 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ZDHHC18Q9NUE0 388 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 NYNRINQ9P2P1 1898 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 GJB6O95452 261 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 CYP2C19P33261 490 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 RAB6CQ53S08 254 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 IQSEC1Q6DN90 963 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 SLC4A11Q8NBS3 891 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 SMG8Q8ND04 991 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 CASKIN2Q8WXE0 1202 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 CYFIP2Q96F07 1278 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 CFHR5Q9BXR6 569 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 MRPL4Q9BYD3 311 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 RAB6CQ9H0N0 254 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 NRBP2Q9NSY0 501 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ANKFY1Q9P2R3 1169 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 RAD51CO43502 376 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 SRGAP2CP0DJJ0 459 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 ABCD1P33897 745 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 SPA17Q15506 151 aa7.07□□□□□ -1.28
USP46-202ENST00000451218 TRIM71Q2Q1W2 868 aaKnown RBP7.07□□□□□ -1.28
USP46-202ENST00000451218 TEX35Q5T0J7 233 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms