RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 PDILTQ8N807 584 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 BEST2Q8NFU1 509 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 NXPE3Q969Y0 559 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 TBC1D7Q9P0N9 293 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 FBXL5Q9UKA1 691 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 FBXL21Q9UKT6 434 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 PCDHB8Q9UN66 801 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 DUSP12Q9UNI6 340 aa16.6■□□□□ 0.25
CHD3-205ENST00000449744 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
CHD3-205ENST00000449744 WDR27A2RRH5 827 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 PRRG1O14668 218 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 FAM189A1O60320 539 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 PPP6R2O75170 966 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 GCNT3O95395 438 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 LRG1P02750 347 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 POU2F2P09086 479 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 ACOT2P49753 483 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 VCPP55072 806 aaKnown RBP16.59■□□□□ 0.25
CHD3-205ENST00000449744 NTHL1P78549 312 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 MRPL58Q14197 206 aaKnown RBP16.59■□□□□ 0.25
CHD3-205ENST00000449744 POSTNQ15063 836 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 RSAD2Q8WXG1 361 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 POMGNT1Q8WZA1 660 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 DNAJC19Q96DA6 116 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 ACCSQ96QU6 501 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 LRRC27Q9C0I9 530 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 CYP4F11Q9HBI6 524 aa16.59■□□□□ 0.25
CHD3-205ENST00000449744 AGO2Q9UKV8 859 aaKnown RBP16.59■□□□□ 0.25
CHD3-205ENST00000449744 TISP43B9A030 160 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 TULP1O00294 542 aaPredicted RBP16.58■□□□□ 0.24
CHD3-205ENST00000449744 TBC1D4O60343 1298 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 ABLIM3O94929 683 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 YEATS4O95619 227 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 ADRB2P07550 413 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 CPB1P15086 417 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 ATF2P15336 505 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 GUCY2FP51841 1108 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
CHD3-205ENST00000449744 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 PABPC1LQ4VXU2 614 aaKnown RBP16.58■□□□□ 0.24
CHD3-205ENST00000449744 IER5LQ5T953 404 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 TPGS2Q68CL5 300 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 JADE1Q6IE81 842 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 USP37Q86T82 979 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 ASB7Q9H672 318 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 PANK4Q9NVE7 773 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 CDH7Q9ULB5 785 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 GTF3C3Q9Y5Q9 886 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 STYXL1Q9Y6J8 313 aa16.58■□□□□ 0.24
CHD3-205ENST00000449744 ZNF318Q5VUA4 2279 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 A0A087X0B3 334 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 M0QZQ0 153 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 CUTAO60888 179 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 PPP1R37O75864 691 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 NFICP08651 508 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 PTPN5P54829 565 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 ALCAMQ13740 583 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 FOXD4L6Q3SYB3 417 aaPredicted RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 FOXD4L3Q6VB84 417 aaPredicted RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 CCDC65Q8IXS2 484 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 TMEM130Q8N3G9 435 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 SLC44A3Q8N4M1 653 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 FLCNQ8NFG4 579 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 OXCT2Q9BYC2 517 aaPredicted RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 OLFML3Q9NRN5 406 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 DNMT3BQ9UBC3 853 aaKnown RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 DERAQ9Y315 318 aa16.57■□□□□ 0.24
CHD3-205ENST00000449744 TIMM13Q9Y5L4 95 aaPredicted RBP16.57■□□□□ 0.24
CHD3-205ENST00000449744 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 NARSO43776 548 aaKnown RBP16.56■□□□□ 0.24
CHD3-205ENST00000449744 F13A1P00488 732 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 CFHP08603 1231 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 SRFP11831 508 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 PTPN2P17706 415 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 PAX3P23760 479 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 AARSP49588 968 aaKnown RBP eCLIP16.56■□□□□ 0.241e-6■■■■■ 36.1
CHD3-205ENST00000449744 AMPD3Q01432 767 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 MTSS1LQ765P7 747 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 TCEAL8Q8IYN2 117 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 SPRYD3Q8NCJ5 442 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 PRSS33Q8NF86 280 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 FGF13Q92913 245 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 STRA6Q9BX79 667 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 TNMDQ9H2S6 317 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 IKZF4Q9H2S9 585 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
CHD3-205ENST00000449744 AFF4Q9UHB7 1163 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms