RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CCDC127Q96BQ5 260 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 DNAJC25Q9H1X3 360 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 SLC28A3Q9HAS3 691 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 IMPACTQ9P2X3 320 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
CCDC171-203ENST00000449575 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC171-203ENST00000449575 USP27XA6NNY8 438 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 PPEF2O14830 753 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 CSPG5O95196 566 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 THP07101 528 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 SLC11A1P49279 550 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 ZBTB6Q15916 424 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 ARHGAP29Q52LW3 1261 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 HSP90AA4PQ58FG1 418 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 SPOUT1Q5T280 376 aaKnown RBP10.65□□□□□ -0.71
CCDC171-203ENST00000449575 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 MLKLQ8NB16 471 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 OR5B17Q8NGF7 314 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 HASPINQ8TF76 798 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 CLP1Q92989 425 aaKnown RBP10.65□□□□□ -0.71
CCDC171-203ENST00000449575 KIF12Q96FN5 646 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 UBN1Q9NPG3 1134 aa10.65□□□□□ -0.71
CCDC171-203ENST00000449575 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.71
CCDC171-203ENST00000449575 ZNF233A6NK53 670 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 GALTP07902 379 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 KCNE1P15382 129 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 BCAR1P56945 870 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 CCZ1BP86790 482 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 CCZ1P86791 482 aaPredicted RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 CYP24A1Q07973 514 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 STIM1Q13586 685 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 RAB30Q15771 203 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 EDRF1Q3B7T1 1238 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 NEK11Q8NG66 645 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 URGCPQ8TCY9 931 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ARNTL2Q8WYA1 636 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ZNF516Q92618 1163 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ELMO3Q96BJ8 720 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 LDHAP00338 332 aaKnown RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 IVLP07476 585 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 DLATP10515 647 aaKnown RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 CLCNKBP51801 687 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 SNRPFP62306 86 aaKnown RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 GRIK3Q13003 919 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 NFIL3Q16649 462 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 EPC2Q52LR7 807 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 C1orf220Q5T0J3 134 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 KCNT2Q6UVM3 1135 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ZC3H3Q8IXZ2 948 aaKnown RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 COLGALT1Q8NBJ5 622 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 MFSD14AQ96MC6 490 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ZNF576Q9H609 170 aa10.64□□□□□ -0.71
CCDC171-203ENST00000449575 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
CCDC171-203ENST00000449575 UNC80Q8N2C7 3258 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 NRP1O14786 923 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 POLR3GO15318 223 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TRIM49P0CI25 452 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TRIM49CP0CI26 452 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 CTNNB1P35222 781 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 OR1G1P47890 313 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 LRRC63Q05C16 580 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TUSC3Q13454 348 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 CD300LGQ6UXG3 332 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 C10orf67Q8IYJ2 551 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 KLHL23Q8NBE8 558 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 CCDC150Q8NCX0 1101 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TMEM174Q8WUU8 243 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 BORCS6Q96GS4 357 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 MYCBPQ99417 103 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 UBXN6Q9BZV1 441 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 PLEKHA5Q9HAU0 1116 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 MARCH5Q9NX47 278 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 RWDD2AQ9UIY3 292 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 LRRIQ3A6PVS8 624 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 BECN2A8MW95 431 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 DNAJB1P25685 340 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 BMPR1AP36894 532 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 ERVK-21P61565 698 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TFAMQ00059 246 aaKnown RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 FKBP3Q00688 224 aaKnown RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 GRIN2CQ14957 1233 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 STX1AQ16623 288 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 SRLQ86TD4 932 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 CSGALNACT2Q8N6G5 542 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 PARD3BQ8TEW8 1205 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 GDPD5Q8WTR4 605 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 FAM193BQ96PV7 902 aaPredicted RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 TRMT1Q9NXH9 659 aaKnown RBP10.63□□□□□ -0.71
CCDC171-203ENST00000449575 KANSL3Q9P2N6 904 aa10.63□□□□□ -0.71
CCDC171-203ENST00000449575 I3L4J1 428 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 CLGNO14967 610 aa10.62□□□□□ -0.71
CCDC171-203ENST00000449575 KIAA0391O15091 583 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms