RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 DGKIO75912 1065 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 PRELPP51888 382 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 MED21Q13503 144 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 EML3Q32P44 896 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 NOP9Q86U38 636 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 PRPF39Q86UA1 669 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 TRIM56Q9BRZ2 755 aaKnown RBP13.09□□□□□ -0.31
UBE3B-204ENST00000449510 NFS1Q9Y697 457 aa13.09□□□□□ -0.31
UBE3B-204ENST00000449510 ATP2B4P23634 1241 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 GNA15P30679 374 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 USP4Q13107 963 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.31
UBE3B-204ENST00000449510 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.31
UBE3B-204ENST00000449510 PCGF5Q86SE9 256 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 TCP10LQ8TDR4 215 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 KCTD10Q9H3F6 313 aa13.08□□□□□ -0.31
UBE3B-204ENST00000449510 MCF2LO15068 1137 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 GRAPQ13588 217 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 TFDP1Q14186 410 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 ZCWPW2Q504Y3 356 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 MROH9Q5TGP6 573 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF483Q8TF39 744 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-204ENST00000449510 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 ATP2A3Q93084 1043 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 MCEEQ96PE7 176 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 SENP7Q9BQF6 1050 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 PIDD1Q9HB75 910 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 IQANK1A0A1B0GTG1 560 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 NEMP1O14524 444 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 KIF3CO14782 793 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 LCA5LO95447 670 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 CYP11B1P15538 503 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 PECAM1P16284 738 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-204ENST00000449510 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 AOC3Q16853 763 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 IL31Q6EBC2 164 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 RNF148Q8N7C7 305 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF317Q96PQ6 595 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-204ENST00000449510 VPS11Q9H270 941 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 PCMTD2Q9NV79 361 aa13.08□□□□□ -0.32
UBE3B-204ENST00000449510 CSDE1O75534 798 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 GRAP2O75791 330 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 NDUFB10O96000 172 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 APRTP07741 180 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ORC1Q13415 861 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 BMPR2Q13873 1038 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 TMEM119Q4V9L6 283 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ZCCHC23Q6ZST2 131 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CCDC17Q96LX7 622 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 IWS1Q96ST2 819 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 DENND2DQ9H6A0 471 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ETAA1Q9NY74 926 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 SLC9A2Q9UBY0 812 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 XRN1Q8IZH2 1706 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PDE5AO76074 875 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 USP1O94782 785 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PGM3O95394 542 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 RBBP8NLQ8NC74 664 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ATXN2LQ8WWM7 1075 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PYDC1Q8WXC3 89 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CLPTM1LQ96KA5 538 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PTPN4P29074 926 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 CAV1Q03135 178 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 BNIP1Q12981 228 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 TRAF1Q13077 416 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 PTK7Q13308 1070 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 MTFR1Q15390 333 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 KHDC1Q4VXA5 237 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ATP11CQ8NB49 1132 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ZNF75CPQ92670 426 aaPredicted RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 FAXDC2Q96IV6 333 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 SCYL1Q96KG9 808 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 FBXO28Q9NVF7 368 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
UBE3B-204ENST00000449510 KAT6AQ92794 2004 aa13.07□□□□□ -0.32
UBE3B-204ENST00000449510 AFF2P51816 1311 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms