RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TMEM39BQ9GZU3 492 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TYW1Q9NV66 732 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 KIAA1024Q9UPX6 916 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 TBX3O15119 743 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 UCHL3P15374 230 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 CDK7P50613 346 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 PLTPP55058 493 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLC34A1Q06495 639 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 GIT2Q14161 759 aa14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
SYNGAP1-204ENST00000449372 POTEJP0CG39 1038 aa14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 TTLL12Q14166 644 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 ZCWPW2Q504Y3 356 aa14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 MARK2Q7KZI7 788 aaKnown RBP14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 CKAP2Q8WWK9 683 aa14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 SLC7A6OSQ96CW6 309 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 FRMD4BQ9Y2L6 1034 aa14.27□□□□□ -0.12
SYNGAP1-204ENST00000449372 WNT10BO00744 389 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 BCRP11274 1271 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 KRT13P13646 458 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 CHRNA3P32297 505 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 ACVR2BQ13705 512 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 METTL13Q8N6R0 699 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 ARHGEF2Q92974 986 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 NMD3Q96D46 503 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 EHMT1Q9H9B1 1298 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 IGLV3-22A0A075B6J6 115 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 AUHQ13825 339 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 CGB2Q6NT52 195 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 RASGEF1CQ8N431 466 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 ATP11CQ8NB49 1132 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 DTX3LQ8TDB6 740 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 DEFB129Q9H1M3 183 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZNF711Q9Y462 761 aa14.27□□□□□ -0.13
SYNGAP1-204ENST00000449372 FAM13AO94988 1023 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 TMEM253P0C7T8 217 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 MAN1A1P33908 653 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 CAP2P40123 477 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 AP1B1Q10567 949 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 C4orf50Q6ZRC1 276 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 NME8Q8N427 588 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 TEPSINQ96N21 525 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 SIKE1Q9BRV8 207 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 PACSIN1Q9BY11 444 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 SEMA4AQ9H3S1 761 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 ARHGEF38Q9NXL2 777 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 CNOT7Q9UIV1 285 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 VAV3Q9UKW4 847 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 TRAF3IP3Q9Y228 551 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 NPHP3-ACAD11A0A0J9YXS1 232 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 KRT36O76013 467 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 HOXD12P35452 270 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 PSMC2P35998 433 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 DRG2P55039 364 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZNF280AP59817 542 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 SLC15A3Q8IY34 581 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 GLIS3Q8NEA6 775 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 PITPNM3Q9BZ71 974 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 GANQ9H2C0 597 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 TMOD2Q9NZR1 351 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 MED24O75448 989 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 SPATA31C1P0DKV0 1188 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 VARSP26640 1264 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 STAT2P52630 851 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 POLGP54098 1239 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 PTK2Q05397 1052 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 ADCY1Q08828 1119 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 R3HDM1Q15032 1099 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 ST13P4Q8IZP2 240 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 CFAP61Q8NHU2 1237 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 DNAJC1Q96KC8 554 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 MKNK1Q9BUB5 465 aa14.26□□□□□ -0.13
SYNGAP1-204ENST00000449372 TBX10O75333 385 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 STX2P32856 288 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 SLC12A3P55017 1021 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 MTFR1Q15390 333 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 RFWD3Q6PCD5 774 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 CYP4X1Q8N118 509 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 PDCD7Q8N8D1 485 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 GRAMD1AQ96CP6 724 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 ROPN1BQ9BZX4 212 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 ROPN1Q9HAT0 212 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 TBC1D7Q9P0N9 293 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 NFKBIEO00221 500 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 CBX6O95503 412 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 CREB1P16220 341 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 CA8P35219 290 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 ZNF76P36508 570 aa14.25□□□□□ -0.13
SYNGAP1-204ENST00000449372 USH1GQ495M9 461 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms