RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 BARGINQ6ZT62 677 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 PROM2Q8N271 834 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 EML4Q9HC35 981 aaKnown RBP13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 APOBEC2Q9Y235 224 aaKnown RBP13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 FLOT2Q14254 428 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 ENOSF1Q7L5Y1 443 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 ZNF438Q7Z4V0 828 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 PNKPQ96T60 521 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 CYP4F11Q9HBI6 524 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 TUBE1Q9UJT0 475 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 CAND2O75155 1236 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 ZNF445P59923 1031 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 ITPK1Q13572 414 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 MIB1Q86YT6 1006 aa13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 PPARGC1AQ9UBK2 798 aaKnown RBP13.4□□□□□ -0.26
AC006001.3-201ENST00000449307 WEE2P0C1S8 567 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 PDGFRAP16234 1089 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 TAF6P49848 677 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 RESP18Q5W5W9 173 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 SLC30A5Q8TAD4 765 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 BCAS4Q8TDM0 211 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 AKAP7Q9P0M2 348 aaPredicted RBP13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 NOVA2Q9UNW9 492 aaKnown RBP13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 DTNAQ9Y4J8 743 aa13.4□□□□□ -0.27
AC006001.3-201ENST00000449307 ADM5C9JUS6 153 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 EPHB4P54760 987 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 PDIA2Q13087 525 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 PRMT7Q9NVM4 692 aaPredicted RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 ARHGEF38Q9NXL2 777 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 ADA2Q9NZK5 511 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 SNX24Q9Y343 169 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 CASTOR2A6NHX0 329 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 ITGB3P05106 788 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 C1orf131Q8NDD1 294 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 IPMKQ8NFU5 416 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 CYTH2Q99418 400 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 F5H5T6 163 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 SPAG7O75391 227 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 LARGE1O95461 756 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 HPDLQ96IR7 371 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 MYPNQ86TC9 1320 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 DYRK3O43781 588 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 EEF1DP29692 281 aaKnown RBP13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 SPACA7Q96KW9 195 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 SETSIPP0DME0 302 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 TYK2P29597 1187 aa13.39□□□□□ -0.27
AC006001.3-201ENST00000449307 H2AFYO75367 372 aaKnown RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ESRRGP62508 458 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 FSCBQ5H9T9 825 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CES5AQ6NT32 575 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 RHOT1Q8IXI2 618 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ZC3H15Q8WU90 426 aaKnown RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CCDC3Q9BQI4 270 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CDC27P30260 824 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CCDC85BQ15834 202 aaPredicted RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 P4HA2O15460 535 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 KRT14P02533 472 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CHRM3P20309 590 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 DEFB115Q30KQ5 88 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 TPX2Q9ULW0 747 aaKnown RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 TECPR2O15040 1411 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PSMD3O43242 534 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 NBPF9Q3BBW0 867 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ZBED8Q8IZ13 594 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 GAS2L1Q99501 681 aaPredicted RBP13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 MXRA8Q9BRK3 442 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 MROH8Q9H579 483 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PDIA6Q15084 440 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PPM1LQ5SGD2 360 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ITIH5Q86UX2 942 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 NDOR1Q9UHB4 597 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 RASA4BC9J798 803 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PODXLO00592 558 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ZW10O43264 779 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 RASA4O43374 803 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 POMCP01189 267 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 VCAM1P19320 739 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 ACTR2P61160 394 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PTGISQ16647 500 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 KLHL38Q2WGJ6 581 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 PTPRN2Q92932 1015 aa13.38□□□□□ -0.27
AC006001.3-201ENST00000449307 NRBF2Q96F24 287 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms