RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 FUT10Q6P4F1 479 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
SMPD4-211ENST00000449159 WDR49Q8IV35 697 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 FAM186BQ8IYM0 893 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 RNF168Q8IYW5 571 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-211ENST00000449159 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 CXorf38Q8TB03 319 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 PARD3BQ8TEW8 1205 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 AUTS2Q8WXX7 1259 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 MRPL38Q96DV4 380 aaKnown RBP11.5□□□□□ -0.57
SMPD4-211ENST00000449159 TSPAN18Q96SJ8 248 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 TLR9Q9NR96 1032 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 SIX4Q9UIU6 781 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 PLXNA3P51805 1871 aa11.5□□□□□ -0.57
SMPD4-211ENST00000449159 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 PIRO00625 290 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 CETN3O15182 167 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 MAPK13O15264 365 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 SPTLC1O15269 473 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 TADA2AO75478 443 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 SOD2P04179 222 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 ITGB3P05106 788 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 TMEM191BP0C7N4 346 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 TNNI1P19237 187 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 POLR2BP30876 1174 aaKnown RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 PSMC2P35998 433 aaKnown RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 FKBP3Q00688 224 aaKnown RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 UBE3AQ05086 875 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 SURF1Q15526 300 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 PLPP4Q5VZY2 271 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 C11orf57Q6ZUT1 292 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 NT5DC4Q86YG4 428 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 BORCS6Q96GS4 357 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 FNBP1Q96RU3 617 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 TCF25Q9BQ70 676 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 ENTPD7Q9NQZ7 604 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 ARIH1Q9Y4X5 557 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-211ENST00000449159 C5orf42Q9H799 3197 aa11.49□□□□□ -0.57
SMPD4-211ENST00000449159 BICDL2A1A5D9 508 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 CARNS1A5YM72 827 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 C2CD2LO14523 706 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 FSCN2O14926 492 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 TNNC2P02585 160 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 EPB41P11171 864 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 CLDN10P78369 228 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 TYRO3Q06418 890 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 BFSP1Q12934 665 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 STX1AQ16623 288 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 PTPROQ16827 1216 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 DUOXA2Q1HG44 320 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 TIGD5Q53EQ6 642 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 FAM171A1Q5VUB5 890 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 FOXR2Q6PJQ5 311 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 SASS6Q6UVJ0 657 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 INTS8Q75QN2 995 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 TMC7Q7Z402 723 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 SYAP1Q96A49 352 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 ANKRD36BP1Q96IX9 119 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 MKNK1Q9BUB5 465 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 HERC2P3Q9BVR0 1158 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 SRRTQ9BXP5 876 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 LMAN2LQ9H0V9 348 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 ITGA11Q9UKX5 1188 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 AGAP1Q9UPQ3 857 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 SF3B1O75533 1304 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMPD4-211ENST00000449159 WDFY4Q6ZS81 3184 aa11.48□□□□□ -0.57
SMPD4-211ENST00000449159 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-211ENST00000449159 SYCE3A1L190 88 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 KRT19P08727 400 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 CTSAP10619 480 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 KRT13P13646 458 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 TKTP29401 623 aaKnown RBP11.47□□□□□ -0.57
SMPD4-211ENST00000449159 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-211ENST00000449159 CA8P35219 290 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 GTF2F1P35269 517 aaKnown RBP eCLIP11.47□□□□□ -0.57
SMPD4-211ENST00000449159 GLUD2P49448 558 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 VAMP7P51809 220 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 LILRA4P59901 499 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 PPP3CAQ08209 521 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 PTPN14Q15678 1187 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 TCEAL5Q5H9L2 206 aa11.47□□□□□ -0.57
SMPD4-211ENST00000449159 TDRD10Q5VZ19 366 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms