RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 FAM26FQ5R3K3 315 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 PPFIBP1Q86W92 1011 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 TMEM105Q8N8V8 129 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 C3orf58Q8NDZ4 430 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 KIF12Q96FN5 646 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 DDX27Q96GQ7 796 aaKnown RBP27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 SMOC2Q9H3U7 446 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 GOLPH3LQ9H4A5 285 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 TUBGCP4Q9UGJ1 667 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 LIMD1Q9UGP4 676 aa27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 RIF1Q5UIP0 2472 aaKnown RBP27.22■■□□□ 1.95
HTATSF1-203ENST00000448450 PTPRZ1P23471 2315 aaPredicted RBP27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 SPDYE4A6NLX3 237 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 PROB1E7EW31 1015 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 I3L4J1 428 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 PODXLO00592 558 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 POSTNQ15063 836 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 PRSS55Q6UWB4 352 aaPredicted RBP27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 CD300LGQ6UXG3 332 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 STXBP4Q6ZWJ1 553 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 SLC22A17Q8WUG5 538 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 USP25Q9UHP3 1055 aa27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 PDCD11Q14690 1871 aaKnown RBP27.21■■□□□ 1.95
HTATSF1-203ENST00000448450 FAM237AA0A1B0GTK4 181 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 TEX28O15482 410 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 BRCC3P46736 316 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 RTP2Q5QGT7 225 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 ASTLQ6HA08 431 aaPredicted RBP27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 KANK3Q6NY19 840 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 GLYCTKQ8IVS8 523 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 ZSWIM2Q8NEG5 633 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 NOC3LQ8WTT2 800 aaKnown RBP27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 ACSF2Q96CM8 615 aaPredicted RBP27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 TTPALQ9BTX7 342 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 TMEM206Q9H813 350 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 SFXN1Q9H9B4 322 aa27.2■■□□□ 1.94
HTATSF1-203ENST00000448450 WDR87Q6ZQQ6 2873 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 PVALEFA0A1B0GWK0 134 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 TMEM189-UBE2V1I3L0A0 370 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 RPL17P18621 184 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 RPL9P32969 192 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 ELAVL2Q12926 359 aaKnown RBP27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 TMC5Q6UXY8 1006 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 SAAL1Q96ER3 474 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 PCIF1Q9H4Z3 704 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 RXFP1Q9HBX9 757 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 SLC39A2Q9NP94 309 aa27.19■■□□□ 1.94
HTATSF1-203ENST00000448450 GOLGA8IPA6NC78 632 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 GOLGA6L4A6NEF3 574 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 GOLGA8JA6NMD2 632 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 HOXD13P35453 343 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 GUCY2FP51841 1108 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 ZBTB6Q15916 424 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 JADE1Q6IE81 842 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 CRELD2Q6UXH1 353 aaPredicted RBP27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 CCDC149Q6ZUS6 474 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 CBWD1Q9BRT8 395 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 FAM213AQ9BRX8 229 aa27.18■■□□□ 1.94
HTATSF1-203ENST00000448450 FAM186AA6NE01 2351 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 ADH1AP07327 375 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 ADRB2P07550 413 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 ANP32AP39687 249 aaKnown RBP27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 CLCN4P51793 760 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 EHHADHQ08426 723 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 EPM2AIP1Q7L775 607 aaPredicted RBP27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 OTOP3Q7RTS5 596 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 PALB2Q86YC2 1186 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 NELFCDQ8IXH7 590 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 ZNF507Q8TCN5 953 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 UBQLN1Q9UMX0 589 aaKnown RBP27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 NUB1Q9Y5A7 615 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 C2orf16Q68DN1 1984 aa27.17■■□□□ 1.94
HTATSF1-203ENST00000448450 EIF3DO15371 548 aaKnown RBP eCLIP27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 TRAPPC3O43617 180 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 KLRC4O43908 158 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 ZNF202O95125 648 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 NFICP08651 508 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 GARTP22102 1010 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 NBL1P41271 181 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 CLCN5P51795 746 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 ARMCX5Q6P1M9 558 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 GPR149Q86SP6 731 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 CD302Q8IX05 232 aa27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 LNX1Q8TBB1 728 aaPredicted RBP27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.16■■□□□ 1.94
HTATSF1-203ENST00000448450 PRR29P0C7W0 189 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 SPATA31D3P0C874 917 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 FGFR3P22607 806 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 TKTP29401 623 aaKnown RBP27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 TMEM132DQ14C87 1099 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 PSMD5Q16401 504 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 KMT5BQ4FZB7 885 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 KRBA2Q6ZNG9 492 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 SPATA31D4Q6ZUB0 917 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 ASCL5Q7RTU5 278 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 SCFD1Q8WVM8 642 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 EXOC1Q9NV70 894 aa27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 CIZ1Q9ULV3 898 aaPredicted RBP27.15■■□□□ 1.94
HTATSF1-203ENST00000448450 VWA8A3KMH1 1905 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms