RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 SYDE2Q5VT97 1194 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 SYDE1Q6ZW31 735 aaPredicted RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 USP17L1Q7RTZ2 530 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 TTC7BQ86TV6 843 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC25A41Q8N5S1 370 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 GRK7Q8WTQ7 553 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 CLPTM1LQ96KA5 538 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 RBM15Q96T37 977 aaKnown RBP eCLIP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 AGPAT1Q99943 283 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 SYT11Q9BT88 431 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 POLR3CQ9BUI4 534 aaPredicted RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 TIMMDC1Q9NPL8 285 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 A0A1W2PPM1 405 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PLS3P13797 630 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 VCLP18206 1134 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 ADRA1DP25100 572 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 ACTR3P61158 418 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PHEXP78562 749 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 GRM2Q14416 872 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PDK3Q15120 406 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 LRRC8BQ6P9F7 803 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 KLHDC10Q6PID8 442 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PIP4K2CQ8TBX8 421 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 MORC4Q8TE76 937 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 GAB3Q8WWW8 586 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PRPF31Q8WWY3 499 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 MTBPQ96DY7 904 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 BTBD6Q96KE9 485 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 MKNK2Q9HBH9 465 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 ALG13Q9NP73 1137 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 PCDHA12Q9UN75 941 aa9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 TDRKHQ9Y2W6 561 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-204ENST00000448416 FRMPD4Q14CM0 1322 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 POTECB2RU33 542 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 PDXKO00764 312 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 FCHO1O14526 889 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 RRM1P23921 792 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 RPL5P46777 297 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 CD97P48960 835 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 CHN2P52757 468 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SFT2D3Q587I9 215 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 IZUMO3Q5VZ72 239 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 DIS3LQ8TF46 1054 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SKA1Q96BD8 255 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 MXD3Q9BW11 206 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 USP29Q9HBJ7 922 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SAYSD1Q9NPB0 183 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 MCM9Q9NXL9 1143 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 KDM3AQ9Y4C1 1321 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SPDYE16A6NNV3 312 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 BOLA2-SMG1P6H3BVE0 249 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 DNAJC6O75061 913 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 CLPTM1O96005 669 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 ENO1P06733 434 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 MAN1A1P33908 653 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 GYG1P46976 350 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 GPSM2P81274 684 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 KBTBD12Q3ZCT8 623 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 ZNF746Q6NUN9 644 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SLC20A1Q8WUM9 679 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 CORO1BQ9BR76 489 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 TSSK1BQ9BXA7 367 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 MANSC1Q9H8J5 431 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 SPATA7Q9P0W8 599 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 NDC80O14777 642 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 PLSCR1O15162 318 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 BUD23O43709 281 aaKnown RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 STRNO43815 780 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 TYROBPO43914 113 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 FKBP6O75344 327 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 TSPY3P0CV98 308 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 TSPY8P0CW00 308 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 KRT4P19013 534 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 GCAP28676 217 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 GTF2H1P32780 548 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 TNNI2P48788 182 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 DLG1Q12959 904 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 BTG3Q14201 252 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 HP1BP3Q5SSJ5 553 aaPredicted RBP9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 ULK2Q8IYT8 1036 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 HSPBAP1Q96EW2 488 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 VPS37BQ9H9H4 285 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 PFDN4Q9NQP4 134 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
SYNPO2-204ENST00000448416 POTEB3A0JP26 581 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 TRIM43BA6NCK2 446 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 C2orf71A6NGG8 1288 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 FSCN2O14926 492 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 TM7SF2O76062 418 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 PDE5AO76074 875 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 STK10O94804 968 aaKnown RBP9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 ABHD2P08910 425 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 BCRP11274 1271 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 YY1P25490 414 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 RASA2Q15283 850 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 LPCAT4Q643R3 524 aa9.94□□□□□ -0.82
SYNPO2-204ENST00000448416 GRAMD4Q6IC98 578 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms