RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ARID2Q68CP9 1835 aa15.8■□□□□ 0.12
SF1-211ENST00000448404 SHOX2O60902 331 aaPredicted RBP15.79■□□□□ 0.12
SF1-211ENST00000448404 GTF2H1P32780 548 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 GCNT1Q02742 428 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 TARBP2Q15633 366 aaKnown RBP15.79■□□□□ 0.12
SF1-211ENST00000448404 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
SF1-211ENST00000448404 CHST13Q8NET6 341 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 PCDHA3Q9Y5H8 950 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 ADCY3O60266 1144 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 MSCO60682 206 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 RWDD2BP57060 319 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 IFFO1Q0D2I5 559 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 SH3D19Q5HYK7 790 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 C1orf131Q8NDD1 294 aaKnown RBP15.79■□□□□ 0.12
SF1-211ENST00000448404 TMEM174Q8WUU8 243 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 HVCN1Q96D96 273 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 ADAM22Q9P0K1 906 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 PNMA2Q9UL42 364 aa15.79■□□□□ 0.12
SF1-211ENST00000448404 TTC7AQ9ULT0 858 aaPredicted RBP15.79■□□□□ 0.12
SF1-211ENST00000448404 KRT19P08727 400 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 RALAP11233 206 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 CHKAP35790 457 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 COILP38432 576 aaPredicted RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 IFI35P80217 286 aaPredicted RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 NOL9Q5SY16 702 aaKnown RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 B4GALNT4Q76KP1 1039 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 DNERQ8NFT8 737 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 EPS8L3Q8TE67 593 aaKnown RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 SEPT1Q8WYJ6 367 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 TFAP2BQ92481 460 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 GPR20Q99678 358 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 AZI2Q9H6S1 392 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 YY1AP1Q9H869 796 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 GEMIN8Q9NWZ8 242 aaKnown RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 PCDHB2Q9Y5E7 798 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 ADGRA2Q96PE1 1338 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 IVLP07476 585 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 CLTAP09496 248 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 CTNNA2P26232 953 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 LSP1P33241 339 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 SNRPFP62306 86 aaKnown RBP15.78■□□□□ 0.12
SF1-211ENST00000448404 ADCY1Q08828 1119 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 SGO2Q562F6 1265 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 EFCAB13Q8IY85 973 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 GPATCH11Q8N954 259 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 SLC17A8Q8NDX2 589 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 OPTNQ96CV9 577 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 CCDC114Q96M63 670 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 ADAM33Q9BZ11 813 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 CXCL16Q9H2A7 254 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 GINS2Q9Y248 185 aa15.78■□□□□ 0.12
SF1-211ENST00000448404 IGKV6D-21A0A0A0MT36 114 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 MIF4GDA9UHW6 222 aaKnown RBP15.77■□□□□ 0.12
SF1-211ENST00000448404 DKC1O60832 514 aaKnown RBP eCLIP15.77■□□□□ 0.12
SF1-211ENST00000448404 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 ACSL3O95573 720 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 ICAM3P32942 547 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 MAGEA9P43362 315 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 PPP1R7Q15435 360 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 MON1BQ7L1V2 547 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 SEC14L1Q92503 715 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 RPS6KC1Q96S38 1066 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 WNT8AQ9H1J5 351 aa15.77■□□□□ 0.12
SF1-211ENST00000448404 GOLGA6L10A6NI86 522 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 NDUFAB1O14561 156 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 PMM2O15305 246 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 TP73O15350 636 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 ZNF286BP0CG31 522 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 CXCL8P10145 99 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 GJA5P36382 358 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 HADHBP55084 474 aaKnown RBP15.77■□□□□ 0.11
SF1-211ENST00000448404 NOMO3P69849 1222 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 METTL7BQ6UX53 244 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 ZNF606Q8WXB4 792 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 LRRC45Q96CN5 670 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 CPB2Q96IY4 423 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 NIFKQ9BYG3 293 aaKnown RBP15.77■□□□□ 0.11
SF1-211ENST00000448404 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.11
SF1-211ENST00000448404 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.11
SF1-211ENST00000448404 F8VP50 259 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 FAM189A1O60320 539 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 PRKCBP05771 671 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 YBX3P16989 372 aaKnown RBP eCLIP15.76■□□□□ 0.112e-9■■□□□ 14
SF1-211ENST00000448404 EDNRBP24530 442 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 PMS2P54278 862 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 RTP1P59025 263 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 OGDHQ02218 1023 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 KRT17Q04695 432 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 MAMLD1Q13495 774 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 USP37Q86T82 979 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 DHX37Q8IY37 1157 aaKnown RBP15.76■□□□□ 0.11
SF1-211ENST00000448404 FAM114A2Q9NRY5 505 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 NRBP2Q9NSY0 501 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 ASIC3Q9UHC3 531 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 STYXL1Q9Y6J8 313 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 EVPLQ92817 2033 aa15.76■□□□□ 0.11
SF1-211ENST00000448404 GOLGA8SH3BPF8 625 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms