RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 LRRN2O75325 713 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 CDH2P19022 906 aaPredicted RBP9.69□□□□□ -0.86
SMC6-207ENST00000448223 NR2F2P24468 414 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 PLOD1Q02809 727 aaPredicted RBP9.69□□□□□ -0.86
SMC6-207ENST00000448223 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 PPP2R3CQ969Q6 453 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 BHMT2Q9H2M3 363 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 ZFYVE1Q9HBF4 777 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 COMMD3-BMI1R4GMX3 469 aa9.69□□□□□ -0.86
SMC6-207ENST00000448223 TNS3Q68CZ2 1445 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 NFIXQ14938 502 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 CCDC153Q494R4 210 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TMEM110Q86TL2 294 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TPH2Q8IWU9 490 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 C1orf112Q9NSG2 853 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 MTO1Q9Y2Z2 717 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 TRIM17Q9Y577 477 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 MIF4GDA9UHW6 222 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 CYTH3O43739 400 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 GAS7O60861 476 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 FSBPO95073 299 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 PYGMP11217 842 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TNNI1P19237 187 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 PDAP1Q13442 181 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 RGS21Q2M5E4 152 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 P3H1Q32P28 736 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 ARMC4Q5T2S8 1044 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TSHZ1Q6ZSZ6 1077 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 CCDC117Q8IWD4 279 aaPredicted RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 RTL3Q8N8U3 475 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 GLMNQ92990 594 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 C19orf60Q96EN9 201 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TSSK1BQ9BXA7 367 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 STK39Q9UEW8 545 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 RAB21Q9UL25 225 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 SLIT3O75094 1523 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 MYMKA6NI61 221 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TNFRSF21O75509 655 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 GHRP10912 638 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 YWHAHQ04917 246 aaPredicted RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 CAPRIN1Q14444 709 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 TRIM71Q2Q1W2 868 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 ARL6IP4Q66PJ3 421 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 THOC7Q6I9Y2 204 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TAGAPQ8N103 731 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TSPAN18Q96SJ8 248 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 DCUN1D5Q9BTE7 237 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TEX12Q9BXU0 123 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 TRIM45Q9H8W5 580 aaPredicted RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 MAGEF1Q9HAY2 307 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 CHORDC1Q9UHD1 332 aaPredicted RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 ARFGEF2Q9Y6D5 1785 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 POTECB2RU33 542 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 EPHB6O15197 1021 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 CFBP00751 764 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 KRT1P04264 644 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 SGSM1Q2NKQ1 1148 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 C16orf89Q6UX73 402 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 NARS2Q96I59 477 aaKnown RBP9.68□□□□□ -0.86
SMC6-207ENST00000448223 NDNQ99608 321 aa9.68□□□□□ -0.86
SMC6-207ENST00000448223 CCDC78A2IDD5 438 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 PI4K2BG5E9Z4 385 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CAMTA2O94983 1202 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 HOXA13P31271 388 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 PPARGP37231 505 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 STAT4Q14765 748 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 MAPK11Q15759 364 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TAF1BQ53T94 588 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 GATAD2AQ86YP4 633 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 SH2D3AQ9BRG2 576 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TRABDQ9H4I3 376 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 STK17AQ9UEE5 414 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TMCO1Q9UM00 188 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 KDM3AQ9Y4C1 1321 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 WDR64B1ANS9 1081 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 KLHL2O95198 593 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 TAL1P17542 331 aaPredicted RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 TAC1P20366 129 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CDC25CP30307 473 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CHRNA3P32297 505 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 BPIFB4P59827 614 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 BFSP2Q13515 415 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 CWF19L1Q69YN2 538 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 DARS2Q6PI48 645 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 OR8H2Q8N162 312 aa9.67□□□□□ -0.86
SMC6-207ENST00000448223 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
SMC6-207ENST00000448223 DNAAF3Q8N9W5 541 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms