RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 TGM5O43548 720 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 EXTL3O43909 919 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 MYL1P05976 194 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 POU5F1Q01860 360 aaKnown RBP27.1■■□□□ 1.93
UFD1-204ENST00000447868 ITIH3Q06033 890 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 CBX2Q14781 532 aaPredicted RBP27.1■■□□□ 1.93
UFD1-204ENST00000447868 TMC5Q6UXY8 1006 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 GJD3Q8N144 294 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 SFXN1Q9H9B4 322 aa27.1■■□□□ 1.93
UFD1-204ENST00000447868 RBAKQ9NYW8 714 aaPredicted RBP27.1■■□□□ 1.93
UFD1-204ENST00000447868 PPEF2O14830 753 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 ADAM12O43184 909 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 IL18RAPO95256 599 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 RPN1P04843 607 aaKnown RBP27.09■■□□□ 1.93
UFD1-204ENST00000447868 WNT7BP56706 349 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 BRSK2Q8IWQ3 736 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 GPD1LQ8N335 351 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 FEZF2Q8TBJ5 459 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 SUSD3Q96L08 255 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 C2CD2Q9Y426 696 aa27.09■■□□□ 1.93
UFD1-204ENST00000447868 TGFB1I1O43294 461 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 STK4Q13043 487 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 VARS2Q5ST30 1063 aaKnown RBP27.08■■□□□ 1.93
UFD1-204ENST00000447868 ELMSAN1Q6PJG2 1045 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 ANKS3Q6ZW76 656 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 EFCAB13Q8IY85 973 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 AGPAT3Q9NRZ7 376 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 HSPBP1Q9NZL4 362 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 MTRRQ9UBK8 725 aa27.08■■□□□ 1.93
UFD1-204ENST00000447868 SYN3O14994 580 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 CLIC2O15247 247 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 OR1D2P34982 312 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 PSMD2Q13200 908 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 BMT2Q1RMZ1 405 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 C9orf57Q5W0N0 161 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 KIAA0895Q8NCT3 520 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 POP1Q99575 1024 aaKnown RBP27.07■■□□□ 1.92
UFD1-204ENST00000447868 PHF7Q9BWX1 381 aaPredicted RBP27.07■■□□□ 1.92
UFD1-204ENST00000447868 DPP3Q9NY33 737 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 DPP7Q9UHL4 492 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 CDY1Q9Y6F8 540 aa27.07■■□□□ 1.92
UFD1-204ENST00000447868 MTCL1Q9Y4B5 1905 aaKnown RBP27.06■■□□□ 1.92
UFD1-204ENST00000447868 NCOR1O75376 2440 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 KIAA0391O15091 583 aaKnown RBP27.06■■□□□ 1.92
UFD1-204ENST00000447868 CYP2J2P51589 502 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 DPYDQ12882 1025 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 LILRA6Q6PI73 481 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 RSPO2Q6UXX9 243 aaPredicted RBP27.06■■□□□ 1.92
UFD1-204ENST00000447868 DSTYKQ6XUX3 929 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 HS2ST1Q7LGA3 356 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 KREMEN2Q8NCW0 462 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 RPGRIP1Q96KN7 1286 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 RIPOR3Q96MK2 946 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 PCDHB8Q9UN66 801 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 BACE2Q9Y5Z0 518 aa27.06■■□□□ 1.92
UFD1-204ENST00000447868 C19orf67A6NJJ6 358 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 SP100P23497 879 aaPredicted RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 MTHFRP42898 656 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 TFAMQ00059 246 aaKnown RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 KNOP1Q1ED39 458 aaKnown RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 ATAT1Q5SQI0 421 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 CBWD2Q8IUF1 395 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 FMR1NBQ8N0W7 255 aaPredicted RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 CCDC47Q96A33 483 aaKnown RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 PLEKHA4Q9H4M7 779 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 POMKQ9H5K3 350 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 PDE11AQ9HCR9 933 aa27.05■■□□□ 1.92
UFD1-204ENST00000447868 TIMM13Q9Y5L4 95 aaPredicted RBP27.05■■□□□ 1.92
UFD1-204ENST00000447868 MUC3AQ02505 3323 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 CCDC195A0A1B0GUA6 201 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 ZNF233A6NK53 670 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 RFPL2O75678 378 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 C1RP00736 705 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 GPR149Q86SP6 731 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 NT5DC4Q86YG4 428 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 APPL2Q8NEU8 664 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 HDAC7Q8WUI4 952 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 FAM84AQ96KN4 292 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 NECTIN4Q96NY8 510 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 FBXW11Q9UKB1 542 aa27.04■■□□□ 1.92
UFD1-204ENST00000447868 ANO9A1A5B4 782 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 H7C4K7 107 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 M0QZQ0 153 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 PIRO00625 290 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 AARSP49588 968 aaKnown RBP eCLIP27.03■■□□□ 1.92
UFD1-204ENST00000447868 ARPP19P56211 112 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 LILRA4P59901 499 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 SNRPFP62306 86 aaKnown RBP27.03■■□□□ 1.92
UFD1-204ENST00000447868 RAB33AQ14088 237 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 CTXN3Q4LDR2 81 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 RDH13Q8NBN7 331 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 CCDC34Q96HJ3 373 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 TSHZ2Q9NRE2 1034 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 CHMP5Q9NZZ3 219 aa27.03■■□□□ 1.92
UFD1-204ENST00000447868 SCN1AP35498 2009 aa27.02■■□□□ 1.92
UFD1-204ENST00000447868 C2orf16Q68DN1 1984 aa27.02■■□□□ 1.92
UFD1-204ENST00000447868 SPTLC1O15269 473 aa27.02■■□□□ 1.92
UFD1-204ENST00000447868 FAM160A1Q05DH4 1040 aa27.02■■□□□ 1.92
UFD1-204ENST00000447868 SNW1Q13573 536 aaKnown RBP27.02■■□□□ 1.92
UFD1-204ENST00000447868 MRPL58Q14197 206 aaKnown RBP27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms