RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 MAGEA10P43363 369 aaPredicted RBP9.28□□□□□ -0.92
TTC39A-212ENST00000447632 IRAK1P51617 712 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 SPA17Q15506 151 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 NOTUMQ6P988 496 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 HS2ST1Q7LGA3 356 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
TTC39A-212ENST00000447632 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 FAM76AQ8TAV0 307 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
TTC39A-212ENST00000447632 NFKBIZQ9BYH8 718 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 TMEM206Q9H813 350 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 FAM207AQ9NSI2 230 aaPredicted RBP9.28□□□□□ -0.92
TTC39A-212ENST00000447632 GOLGA6AQ9NYA3 693 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 EXOC7Q9UPT5 735 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 SIK3Q9Y2K2 1263 aa9.28□□□□□ -0.92
TTC39A-212ENST00000447632 H0YCG3 227 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 NCK2O43639 380 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 TOM1L1O75674 476 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 KIF11P52732 1056 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 IKBKEQ14164 716 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 DNAJC21Q5F1R6 531 aaKnown RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 ZNF572Q7Z3I7 529 aaPredicted RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 TSEN2Q8NCE0 465 aaKnown RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 LINC01599Q8WXQ3 324 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 OSBPL9Q96SU4 736 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 ST6GALNAC4Q9H4F1 302 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 RABEP2Q9H5N1 569 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 AGO2Q9UKV8 859 aaKnown RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 PCDHB2Q9Y5E7 798 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 ZMYM2Q9UBW7 1377 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 EIF3DO15371 548 aaKnown RBP eCLIP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 EXOC3O60645 756 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 CAND2O75155 1236 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 TACC1O75410 805 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 FGBP02675 491 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 NR2F2P24468 414 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 GATMP50440 423 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 C9orf50Q5SZB4 431 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 UBXN11Q5T124 520 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 LMBRD2Q68DH5 695 aaPredicted RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 CBWD2Q8IUF1 395 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 FAM114A1Q8IWE2 563 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 CCDC127Q96BQ5 260 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
TTC39A-212ENST00000447632 ADPGKQ9BRR6 497 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 TSGA10Q9BZW7 698 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 CDT1Q9H211 546 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 PTPRHQ9HD43 1115 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 HSPBP1Q9NZL4 362 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 TNFSF13BQ9Y275 285 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 INPP5FQ9Y2H2 1132 aa9.27□□□□□ -0.93
TTC39A-212ENST00000447632 NR3C1P04150 777 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 RPLP2P05387 115 aaKnown RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 FGFR1P11362 822 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 DEFB103AP81534 67 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 TTC31Q49AM3 519 aaPredicted RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 VWA3BQ502W6 1294 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 GLRA4Q5JXX5 417 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 FKBP15Q5T1M5 1219 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 TTC19Q6DKK2 380 aaPredicted RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 CENPPQ6IPU0 288 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 SLC27A1Q6PCB7 646 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 MPZL3Q6UWV2 235 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 RPUSD2Q8IZ73 545 aaKnown RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 USP38Q8NB14 1042 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 SLC17A8Q8NDX2 589 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 ZFP42Q96MM3 310 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 SH3GL2Q99962 352 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 NDST4Q9H3R1 872 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 MMRN2Q9H8L6 949 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 IL23AQ9NPF7 189 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 FAM105AQ9NUU6 356 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 IPPQ9Y573 584 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 A0A0B4J269 797 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 LRRC53A6NM62 1247 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 LCA5LO95447 670 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 STAG3L1P0CL83 205 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 PRLRP16471 622 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 CCT5P48643 541 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 ITIH3Q06033 890 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 FAM187BQ17R55 369 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 TMEM240Q5SV17 173 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 PPP4R3CPQ6ZMV5 832 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 SMG8Q8ND04 991 aaKnown RBP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 ARL8AQ96BM9 186 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.93
TTC39A-212ENST00000447632 CACNG4Q9UBN1 327 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 CNTNAP2Q9UHC6 1331 aa9.26□□□□□ -0.93
TTC39A-212ENST00000447632 PDXKO00764 312 aa9.25□□□□□ -0.93
TTC39A-212ENST00000447632 ABLIM1O14639 778 aa9.25□□□□□ -0.93
TTC39A-212ENST00000447632 AKAP3O75969 853 aa9.25□□□□□ -0.93
TTC39A-212ENST00000447632 CXCL10P02778 98 aa9.25□□□□□ -0.93
TTC39A-212ENST00000447632 CXCL8P10145 99 aa9.25□□□□□ -0.93
TTC39A-212ENST00000447632 DLATP10515 647 aaKnown RBP9.25□□□□□ -0.93
TTC39A-212ENST00000447632 WNT7BP56706 349 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms