RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TTC28Q96AY4 2481 aa16.09■□□□□ 0.17
HDAC4-204ENST00000446876 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 TGM5O43548 720 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 XPOTO43592 962 aaKnown RBP16.08■□□□□ 0.16
HDAC4-204ENST00000446876 TRAPPC3O43617 180 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-204ENST00000446876 GLUD1P00367 558 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 CYP2J2P51589 502 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
HDAC4-204ENST00000446876 RSPO2Q6UXX9 243 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-204ENST00000446876 TMC5Q6UXY8 1006 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 GPR65Q8IYL9 337 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 ENGASEQ8NFI3 743 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 SUSD6Q92537 303 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 SUSD3Q96L08 255 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 ASB7Q9H672 318 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 DZANK1Q9NVP4 752 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 FAM50BQ9Y247 325 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 DERAQ9Y315 318 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 C2CD2Q9Y426 696 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 DENND4AQ7Z401 1863 aa16.08■□□□□ 0.16
HDAC4-204ENST00000446876 IL18RAPO95256 599 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 LDHAP00338 332 aaKnown RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 MYL1P05976 194 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 TFAMQ00059 246 aaKnown RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 CREMQ03060 361 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 ZP2Q05996 745 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 FAM160A1Q05DH4 1040 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 PNOCQ13519 176 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 VARS2Q5ST30 1063 aaKnown RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 LMBRD2Q68DH5 695 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 ERCC4Q92889 916 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 TSPAN18Q96SJ8 248 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 PDE11AQ9HCR9 933 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-204ENST00000446876 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
HDAC4-204ENST00000446876 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 SPTLC1O15269 473 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 RFPL2O75678 378 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-204ENST00000446876 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-204ENST00000446876 OR1D2P34982 312 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 POU5F1Q01860 360 aaKnown RBP16.06■□□□□ 0.16
HDAC4-204ENST00000446876 PSMD2Q13200 908 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 CBX2Q14781 532 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-204ENST00000446876 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
HDAC4-204ENST00000446876 LILRA6Q6PI73 481 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 HS2ST1Q7LGA3 356 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 ADAM7Q9H2U9 754 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 SFXN1Q9H9B4 322 aa16.06■□□□□ 0.16
HDAC4-204ENST00000446876 CUL9Q8IWT3 2517 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 TNFRSF10AO00220 468 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 PIRO00625 290 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 SYN3O14994 580 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 KIAA0391O15091 583 aaKnown RBP16.05■□□□□ 0.16
HDAC4-204ENST00000446876 RHOBTB3O94955 611 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC4-204ENST00000446876 CES5AQ6NT32 575 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 PDXDC1Q6P996 788 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 DSTYKQ6XUX3 929 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 ANKS3Q6ZW76 656 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 ADHFE1Q8IWW8 467 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 KREMEN2Q8NCW0 462 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 MTMR12Q9C0I1 747 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 POMKQ9H5K3 350 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 PCDHB8Q9UN66 801 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 DOCK6Q96HP0 2047 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 NCOR1O75376 2440 aa16.05■□□□□ 0.16
HDAC4-204ENST00000446876 ZNF233A6NK53 670 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 M0QZQ0 153 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 ARPP19P56211 112 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 LILRA4P59901 499 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 ITIH3Q06033 890 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
HDAC4-204ENST00000446876 SMYD4Q8IYR2 804 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-204ENST00000446876 GJD3Q8N144 294 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 C1orf127Q8N9H9 656 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 KHSRPQ92945 711 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■■■□ 23.4
HDAC4-204ENST00000446876 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
HDAC4-204ENST00000446876 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 KCTD10Q9H3F6 313 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 PRKAG3Q9UGI9 489 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 FBXL5Q9UKA1 691 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-204ENST00000446876 BACE2Q9Y5Z0 518 aa16.04■□□□□ 0.16
HDAC4-204ENST00000446876 CCDC195A0A1B0GUA6 201 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 C19orf67A6NJJ6 358 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 TBC1D4O60343 1298 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 ITGB3P05106 788 aa16.03■□□□□ 0.16
HDAC4-204ENST00000446876 POLR2BP30876 1174 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms