RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SART1O43290 800 aaKnown RBP18.66■□□□□ 0.58
SMC6-206ENST00000446852 B4GALT4O60513 344 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 TRADDQ15628 312 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 LLGL2Q6P1M3 1020 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 PASD1Q8IV76 773 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 IFT20Q8IY31 132 aa18.66■□□□□ 0.58
SMC6-206ENST00000446852 CCDC188H7C350 402 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 POLR3GO15318 223 aaPredicted RBP18.65■□□□□ 0.58
SMC6-206ENST00000446852 TMEM191BP0C7N4 346 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 PEX5P50542 639 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 EPHB4P54760 987 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 PPFIA1Q13136 1202 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 GRIK4Q16099 956 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 CASKIN2Q8WXE0 1202 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 CPB2Q96IY4 423 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 XYLT2Q9H1B5 865 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 PDZD7Q9H5P4 517 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 TRIP11Q15643 1979 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 A0A0U1RQG5 324 aaPredicted RBP18.65■□□□□ 0.58
SMC6-206ENST00000446852 RRM1P23921 792 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 NOMO3P69849 1222 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 GABPB1Q06547 395 aaPredicted RBP18.65■□□□□ 0.58
SMC6-206ENST00000446852 KCTD19Q17RG1 926 aaPredicted RBP18.65■□□□□ 0.58
SMC6-206ENST00000446852 SND1Q7KZF4 910 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMC6-206ENST00000446852 MON1BQ7L1V2 547 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 TMEM130Q8N3G9 435 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 TRIM7Q9C029 511 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 NIF3L1Q9GZT8 377 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 NMRK2Q9NPI5 230 aa18.65■□□□□ 0.58
SMC6-206ENST00000446852 MROH7Q68CQ1 1323 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 TMOD1P28289 359 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 NSFP46459 744 aaKnown RBP18.64■□□□□ 0.58
SMC6-206ENST00000446852 DGKDQ16760 1214 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 SGSM1Q2NKQ1 1148 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 PRAMEF19Q5SWL8 479 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 IQSEC1Q6DN90 963 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 PHLDB2Q86SQ0 1253 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 UBL4BQ8N7F7 174 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 AVENQ9NQS1 362 aaPredicted RBP18.64■□□□□ 0.58
SMC6-206ENST00000446852 NFU1Q9UMS0 254 aa18.64■□□□□ 0.58
SMC6-206ENST00000446852 THAP12O43422 761 aa18.64■□□□□ 0.57
SMC6-206ENST00000446852 ITGBL1O95965 494 aaPredicted RBP18.64■□□□□ 0.57
SMC6-206ENST00000446852 ARF4P18085 180 aaPredicted RBP18.64■□□□□ 0.57
SMC6-206ENST00000446852 CD58P19256 250 aa18.64■□□□□ 0.57
SMC6-206ENST00000446852 TRPC3Q13507 836 aa18.64■□□□□ 0.57
SMC6-206ENST00000446852 MORN1Q5T089 497 aa18.64■□□□□ 0.57
SMC6-206ENST00000446852 IFT81Q8WYA0 676 aa18.64■□□□□ 0.57
SMC6-206ENST00000446852 RPF1Q9H9Y2 349 aaKnown RBP18.64■□□□□ 0.57
SMC6-206ENST00000446852 NFICP08651 508 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 STAG3L1P0CL83 205 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ASPAP45381 313 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 TNFAIP2Q03169 654 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 EMBQ6PCB8 327 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ADAT2Q7Z6V5 191 aaKnown RBP18.63■□□□□ 0.57
SMC6-206ENST00000446852 RASAL3Q86YV0 1011 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 NLRP7Q8WX94 980 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ERVK-5Q9HDB9 667 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 CISHQ9NSE2 258 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 FLRT1Q9NZU1 646 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 AMACRQ9UHK6 382 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ANAPC7Q9UJX3 599 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 SPOPO43791 374 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 IL18RAPO95256 599 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 TNNC2P02585 160 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 MCF2P10911 925 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
SMC6-206ENST00000446852 SCARA5Q6ZMJ2 495 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 TRIM72Q6ZMU5 477 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ZNF606Q8WXB4 792 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 ANKRD36BP1Q96IX9 119 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 C11orf70Q9BRQ4 267 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 SIX4Q9UIU6 781 aa18.63■□□□□ 0.57
SMC6-206ENST00000446852 LACTBL1A8MY62 500 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 BHMG1C9JSJ3 638 aaPredicted RBP18.62■□□□□ 0.57
SMC6-206ENST00000446852 ZEB2O60315 1214 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 WEE2P0C1S8 567 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 FAM153BP0C7A2 387 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 MYBL1P10243 752 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 GPS2Q13227 327 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 FAM153CQ494X1 144 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 CAVIN3Q969G5 261 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 LENG1Q96BZ8 264 aaPredicted RBP18.62■□□□□ 0.57
SMC6-206ENST00000446852 TRIM11Q96F44 468 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 SLITRK6Q9H5Y7 841 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 SETD4Q9NVD3 440 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 FAM153AQ9UHL3 310 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 TRIP12Q14669 1992 aaPredicted RBP18.62■□□□□ 0.57
SMC6-206ENST00000446852 TSPAN1O60635 241 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 AARSP49588 968 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMC6-206ENST00000446852 POU5F1Q01860 360 aaKnown RBP18.62■□□□□ 0.57
SMC6-206ENST00000446852 MAP2K5Q13163 448 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 PAK2Q13177 524 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 TERF2Q15554 542 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 CCDC102AQ96A19 550 aa18.62■□□□□ 0.57
SMC6-206ENST00000446852 PCDHA3Q9Y5H8 950 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms