RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SERPINB4P48594 390 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 EXOSC10Q01780 885 aaKnown RBP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 PPATQ06203 517 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 DCAF6Q58WW2 860 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPN3-204ENST00000446349 C1QTNF7Q9BXJ2 289 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 CYP3A43Q9HB55 503 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 PKP3Q9Y446 797 aa8.99□□□□□ -0.97
PTPN3-204ENST00000446349 TARSL2A2RTX5 802 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SUPT3HO75486 399 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ASMTLO95671 621 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 LCP1P13796 627 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CDC25AP30304 524 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 STAT4Q14765 748 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ANGPTL8Q6UXH0 198 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 STX19Q8N4C7 294 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SYN2Q92777 582 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PALMO75781 387 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CSPG5O95196 566 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TDP2O95551 362 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 GYS1P13807 737 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 RASA1P20936 1047 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 NKX2-3Q8TAU0 364 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SLC20A1Q8WUM9 679 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 HPDLQ96IR7 371 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TSPAN18Q96SJ8 248 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF518BQ9C0D4 1074 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SIK2Q9H0K1 926 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TMEM260Q9NX78 707 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PAK5Q9P286 719 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CAPN11Q9UMQ6 739 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CLCA2Q9UQC9 943 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CCDC22O60826 627 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TOMM70O94826 608 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TMPRSS15P98073 1019 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 UBXN6Q9BZV1 441 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TRIM9Q9C026 710 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ABHD16BQ9H3Z7 469 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 IGF2BP3O00425 579 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 GNRH1P01148 92 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 NCF2P19878 526 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 THPOP40225 353 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 RCN2Q14257 317 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 EFTUD2Q15029 972 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PID1Q7Z2X4 250 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SAAL1Q96ER3 474 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SEPT5Q99719 369 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 XYLBO75191 536 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 FMO5P49326 533 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 MMS22LQ6ZRQ5 1243 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CCNJLQ8IV13 435 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PASD1Q8IV76 773 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 FMR1NBQ8N0W7 255 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 PDCD7Q8N8D1 485 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CDC26Q8NHZ8 85 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 FBXO44Q9H4M3 255 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 IL31Q6EBC2 164 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 EPM2AIP1Q7L775 607 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 GRAMD1CQ8IYS0 662 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 RNF217Q8TC41 542 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 MROH2AA6NES4 1674 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 OGTO15294 1046 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 AKR1A1P14550 325 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 RFC1P35251 1148 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 EIF3EP60228 445 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 GRIN1Q05586 938 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF177Q13360 481 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CAPRIN1Q14444 709 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 HIST2H2ACQ16777 129 aaPredicted RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 HIST2H2AA3Q6FI13 130 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF410Q86VK4 478 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 IGDCC4Q8TDY8 1250 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 ARL8AQ96BM9 186 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 AIPL1Q9NZN9 384 aa8.98□□□□□ -0.97
PTPN3-204ENST00000446349 CDV3Q9UKY7 258 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 G3BP2Q9UN86 482 aaKnown RBP8.98□□□□□ -0.97
PTPN3-204ENST00000446349 SPECC1L-ADORA2AF8WAN1 911 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 TLR2O60603 784 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 SRGNP10124 158 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 SKP1P63208 163 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 PEX6Q13608 980 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 HIF1AQ16665 826 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 NAPEPLDQ6IQ20 393 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ZNF280DQ6N043 979 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 MYCBPQ99417 103 aaPredicted RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 PARNO95453 639 aaKnown RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 CYP11B2P19099 503 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 GPS1Q13098 491 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 PDAP1Q13442 181 aaKnown RBP8.97□□□□□ -0.97
PTPN3-204ENST00000446349 ITPK1Q13572 414 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 BOLA3Q53S33 107 aa8.97□□□□□ -0.97
PTPN3-204ENST00000446349 RIBC1Q8N443 379 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms