RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZBTB41	Q5SVQ8	909 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	CYP4A22	Q5TCH4	519 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ANKRD20A1	Q5TYW2	823 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ANKRD20A3	Q5VUR7	823 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	TMEM179	Q6ZVK1	233 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	SV2A	Q7L0J3	742 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	FAM81A	Q8TBF8	368 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	DCAF4	Q8WV16	495 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	CCDC17	Q96LX7	622 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	YIPF2	Q9BWQ6	316 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	DNPEP	Q9ULA0	475 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	E2F8	A0AVK6	867 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	SGK1	O00141	431 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	CES2	O00748	559 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ASAP2	O43150	1006 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	GAS8	O95995	478 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	CNGA1	P29973	690 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	KIF22	Q14807	665 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	SLC1A5	Q15758	541 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	EMC10	Q5UCC4	262 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	PCNX4	Q63HM2	1172 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	MIS18BP1	Q6P0N0	1132 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	RFWD3	Q6PCD5	774 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ANKLE1	Q8NAG6	615 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ACCS	Q96QU6	501 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	NUDCD1	Q96RS6	583 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	SYT11	Q9BT88	431 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	PAGR1	Q9BTK6	254 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ARMCX1	Q9P291	453 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	NOCT	Q9UK39	431 aa	Known RBP	13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	ARL2BP	Q9Y2Y0	163 aa		13.29	□□□□□ -0.28
DDR1-238	ENST00000446312	AFF2	P51816	1311 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TP73	O15350	636 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MAP3K13	O43283	966 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ECE2	O60344	883 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	FOS	P01100	380 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MMP10	P09238	476 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ZBTB16	Q05516	673 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TLDC1	Q6P9B6	456 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	BSND	Q8WZ55	320 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	SEC14L1	Q92503	715 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	SNF8	Q96H20	258 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	OSBPL1A	Q9BXW6	950 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PCSK1N	Q9UHG2	260 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	GRID1	Q9ULK0	1009 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PCDHB4	Q9Y5E5	795 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	RBM47	A0AV96	593 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	LRRD1	A4D1F6	860 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	YWHAB	P31946	246 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MAGEA4	P43358	317 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	NSF	P46459	744 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ARSE	P51690	589 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	HIRA	P54198	1017 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MFAP3	P55082	362 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PRKG1	Q13976	671 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	CCDC6	Q16204	474 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	BBS9	Q3SYG4	887 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MTDH	Q86UE4	582 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	JDP2	Q8WYK2	163 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TMEM143	Q96AN5	459 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TAAR1	Q96RJ0	339 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MKNK1	Q9BUB5	465 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	SHCBP1L	Q9BZQ2	653 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TRABD	Q9H4I3	376 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PHTF1	Q9UMS5	762 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PCDHGA4	Q9Y5G9	962 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PCDHA3	Q9Y5H8	950 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	MIF4GD	A9UHW6	222 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ATP6V1G1	O75348	118 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	RARRES1	P49788	294 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	TUB	P50607	506 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	PDIA2	Q13087	525 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	LRRC36	Q1X8D7	754 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	ZBTB33	Q86T24	672 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	NETO2	Q8NC67	525 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	CEP170P1	Q96L14	293 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	CYTH2	Q99418	400 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	NAP1L4	Q99733	375 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	DDX50	Q9BQ39	737 aa	Known RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	WNT8A	Q9H1J5	351 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	NYAP2	Q9P242	653 aa		13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.28	□□□□□ -0.28
DDR1-238	ENST00000446312	DLEC1	Q9Y238	1755 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312		A0A1B0GVG6	124 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	ATP2A2	P16615	1042 aa	Known RBP	13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	GM2A	P17900	193 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	TAC1	P20366	129 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	POLE2	P56282	527 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	MXRA7	P84157	204 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	ALCAM	Q13740	583 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	MTERF2	Q49AM1	385 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	FAXC	Q5TGI0	409 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	MAB21L3	Q8N8X9	362 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	CRYGN	Q8WXF5	182 aa		13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	UTP4	Q969X6	686 aa	Known RBP	13.27	□□□□□ -0.28
DDR1-238	ENST00000446312	PLEKHG4B	Q96PX9	1271 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms