RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 PACSIN3Q9UKS6 424 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 ANGPTL2Q9UKU9 493 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 C2CD2Q9Y426 696 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 SLC16A3O15427 465 aaKnown RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 RNF8O76064 485 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 TJP3O95049 919 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 ARP10275 920 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 ARL4CP56559 192 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 C1orf228Q6PIY5 440 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 ILDR2Q71H61 639 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 FAF2Q96CS3 445 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 RTFDC1Q9BY42 306 aaPredicted RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 MRPL47Q9HD33 250 aaKnown RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 ZNF711Q9Y462 761 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 HNRNPCP07910 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
APLF-203ENST00000445692 ATP4AP20648 1035 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 RPA3P35244 121 aaPredicted RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 POLGP54098 1239 aaPredicted RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 MRPS35P82673 323 aaKnown RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 LMNB2Q03252 620 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 SNRNP35Q16560 246 aaKnown RBP12.74□□□□□ -0.37
APLF-203ENST00000445692 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 GRAMD1AQ96CP6 724 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 PI4KBQ9UBF8 816 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
APLF-203ENST00000445692 DPPA5A6NC42 116 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 MGRN1O60291 552 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 PTDSS1P48651 473 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 AOC3Q16853 763 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 FAM228AQ86W67 206 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 LRRC6Q86X45 466 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 EFCAB3Q8N7B9 438 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 NMD3Q96D46 503 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 MAGEB18Q96M61 343 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 IWS1Q96ST2 819 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 NGRNQ9NPE2 291 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 FAF1Q9UNN5 650 aaPredicted RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 MYH13Q9UKX3 1938 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 SLIT3O75094 1523 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 MCF2LO15068 1137 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CCDC22O60826 627 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 LCA5LO95447 670 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 SERPINB3P29508 390 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 ORC1Q13415 861 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 C6orf89Q6UWU4 347 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 ST13P4Q8IZP2 240 aaPredicted RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 DDX4Q9NQI0 724 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 LRRC4BQ9NT99 713 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 LMO7Q8WWI1 1683 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 ASTN1O14525 1302 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CYP11B1P15538 503 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 VHLP40337 213 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CRKP46108 304 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 MKRN3Q13064 507 aaKnown RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 CEP55Q53EZ4 464 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CYP4A22Q5TCH4 519 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 NUDCD3Q8IVD9 361 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CYP4X1Q8N118 509 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 PPP4R1Q8TF05 950 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 MTBPQ96DY7 904 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 FBXO6Q9NRD1 293 aaPredicted RBP12.73□□□□□ -0.37
APLF-203ENST00000445692 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
APLF-203ENST00000445692 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 MEI4A8MW99 385 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 NOP56O00567 594 aaKnown RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 MYL2P10916 166 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 BGNP21810 368 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 TRIP10Q15642 601 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 MAP7D1Q3KQU3 841 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 C11orf63Q6NUN7 778 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 THNSL1Q8IYQ7 743 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 STK32AQ8WU08 396 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 MYH6P13533 1939 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 PPP1R11O60927 126 aaPredicted RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 CALB2P22676 271 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 SH2D4BQ5SQS7 431 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
APLF-203ENST00000445692 CRLF3Q8IUI8 442 aa12.72□□□□□ -0.37
APLF-203ENST00000445692 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms