RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 VWA8A3KMH1 1905 aa21.82■■□□□ 1.08
LRCH3-208ENST00000443727 DENND4AQ7Z401 1863 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 TISP43B9A030 160 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 PRRG1O14668 218 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 CUTAO60888 179 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 N4BP1O75113 896 aaKnown RBP21.81■■□□□ 1.08
LRCH3-208ENST00000443727 F13A1P00488 732 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 LRPAP1P30533 357 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 ROR1Q01973 937 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 TDGQ13569 410 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 POSTNQ15063 836 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 ZBTB6Q15916 424 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 JADE1Q6IE81 842 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 SLC8B1Q6J4K2 584 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 ZNF280DQ6N043 979 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 SYCP3Q8IZU3 236 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 ZNF461Q8TAF7 563 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 PCDHB8Q9UN66 801 aa21.81■■□□□ 1.08
LRCH3-208ENST00000443727 MTCL1Q9Y4B5 1905 aaKnown RBP21.8■■□□□ 1.08
LRCH3-208ENST00000443727 GUCY2FP51841 1108 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 TMEM132DQ14C87 1099 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
LRCH3-208ENST00000443727 DSTYKQ6XUX3 929 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 RTL10Q7L3V2 364 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 USP37Q86T82 979 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 CCDC65Q8IXS2 484 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 TMEM130Q8N3G9 435 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 KCNG4Q8TDN1 519 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 OLFML3Q9NRN5 406 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 EPS15L1Q9UBC2 864 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 FBXL5Q9UKA1 691 aa21.8■■□□□ 1.08
LRCH3-208ENST00000443727 MYO10Q9HD67 2058 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 ADRB2P07550 413 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 ME1P48163 572 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 AMPD3Q01432 767 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 ALCAMQ13740 583 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 SPATA1Q5VX52 437 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 IQUBQ8NA54 791 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 DHX58Q96C10 678 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 KCNH6Q9H252 994 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 TNMDQ9H2S6 317 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 IKZF4Q9H2S9 585 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 MFSD1Q9H3U5 465 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 CUEDC2Q9H467 287 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 DERAQ9Y315 318 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 STYXL1Q9Y6J8 313 aa21.79■■□□□ 1.08
LRCH3-208ENST00000443727 WDR27A2RRH5 827 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 PPP1R37O75864 691 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 LRG1P02750 347 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 NFICP08651 508 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 LAMP2P13473 410 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 NTHL1P78549 312 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 YWHAHQ04917 246 aaPredicted RBP21.78■■□□□ 1.08
LRCH3-208ENST00000443727 KCNA1Q09470 495 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 MRPL58Q14197 206 aaKnown RBP21.78■■□□□ 1.08
LRCH3-208ENST00000443727 RSAD2Q8WXG1 361 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 STRA6Q9BX79 667 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 ASB7Q9H672 318 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 CYP4F11Q9HBI6 524 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 FBXL21Q9UKT6 434 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
LRCH3-208ENST00000443727 TIMM13Q9Y5L4 95 aaPredicted RBP21.78■■□□□ 1.08
LRCH3-208ENST00000443727 M0QZQ0 153 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 TBC1D4O60343 1298 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 ABLIM3O94929 683 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 PDGFBP01127 241 aaPredicted RBP21.77■■□□□ 1.08
LRCH3-208ENST00000443727 POU2F2P09086 479 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 CPB1P15086 417 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 CASP5P51878 434 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 PABPC1LQ4VXU2 614 aaKnown RBP21.77■■□□□ 1.08
LRCH3-208ENST00000443727 TPGS2Q68CL5 300 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 ATL3Q6DD88 541 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 SHC4Q6S5L8 630 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 STXBP4Q6ZWJ1 553 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 NOC3LQ8WTT2 800 aaKnown RBP21.77■■□□□ 1.08
LRCH3-208ENST00000443727 NXPE3Q969Y0 559 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 FAM13BQ9NYF5 915 aa21.77■■□□□ 1.08
LRCH3-208ENST00000443727 ZFP37Q9Y6Q3 630 aaPredicted RBP21.77■■□□□ 1.08
LRCH3-208ENST00000443727 FRMD3A2A2Y4 597 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 ATF2P15336 505 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 ADSSP30520 456 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 ASIC1P78348 528 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 PKP1Q13835 747 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 C9orf57Q5W0N0 161 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 FAM213AQ9BRX8 229 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 TMEM206Q9H813 350 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 HCFC1R1Q9NWW0 138 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 CDH7Q9ULB5 785 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 DUSP12Q9UNI6 340 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 ZDBF2Q9HCK1 2354 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 MUC6Q6W4X9 2439 aa21.76■■□□□ 1.07
LRCH3-208ENST00000443727 PDCD11Q14690 1871 aaKnown RBP21.75■■□□□ 1.07
LRCH3-208ENST00000443727 PPEF2O14830 753 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 IL18RAPO95256 599 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 ODC1P11926 461 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 PAX3P23760 479 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 AARSP49588 968 aaKnown RBP eCLIP21.75■■□□□ 1.07
LRCH3-208ENST00000443727 LILRA4P59901 499 aa21.75■■□□□ 1.07
LRCH3-208ENST00000443727 POU5F1Q01860 360 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms