RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 GATA6Q92908 595 aa16.08■□□□□ 0.17
CHFR-204ENST00000443047 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.17
CHFR-204ENST00000443047 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.17
CHFR-204ENST00000443047 TUBGCP5Q96RT8 1024 aa16.08■□□□□ 0.17
CHFR-204ENST00000443047 DDX3YO15523 660 aaKnown RBP16.08■□□□□ 0.16
CHFR-204ENST00000443047 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
CHFR-204ENST00000443047 LYNP07948 512 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 VPS41P49754 854 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 IL9RQ01113 521 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 STRN3Q13033 797 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 P3H1Q32P28 736 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 CMPK2Q5EBM0 449 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 PRUNE1Q86TP1 453 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 IL31RAQ8NI17 732 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 MIPOL1Q8TD10 442 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 INPP5DQ92835 1189 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 CEP63Q96MT8 703 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 DCTN4Q9UJW0 460 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 ASTN2O75129 1339 aaPredicted RBP16.08■□□□□ 0.16
CHFR-204ENST00000443047 NFIBO00712 420 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 TBX3O15119 743 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 GAS7O60861 476 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 LMNAP02545 664 aaKnown RBP16.08■□□□□ 0.16
CHFR-204ENST00000443047 TNFAIP8L3Q5GJ75 292 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 MFSD5Q6N075 450 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.16
CHFR-204ENST00000443047 MCUR1Q96AQ8 359 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 FAM192AQ9GZU8 254 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 COL20A1Q9P218 1284 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 ZFP69BQ9UJL9 534 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 WASF2Q9Y6W5 498 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 ASTN1O14525 1302 aa16.08■□□□□ 0.16
CHFR-204ENST00000443047 WNT10BO00744 389 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 OPHN1O60890 802 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 ATP5DP30049 168 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 SLC34A1Q06495 639 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 CXCL9Q07325 125 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 KBTBD2Q8IY47 623 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 VPS52Q8N1B4 723 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 PRELID2Q8N945 189 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 DNAJC1Q96KC8 554 aaKnown RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 MIPEPQ99797 713 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 UNC45AQ9H3U1 944 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 TCRBV7S2A1N4TA0A589 114 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 CFAP69A5D8W1 941 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 TMEM150BA6NC51 233 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 PSMD10O75832 226 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 CAP2P40123 477 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 PTGIRP43119 386 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 MTA1Q13330 715 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHFR-204ENST00000443047 RDH13Q8NBN7 331 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 ZNF577Q9BSK1 485 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 TMEM109Q9BVC6 243 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 ROPN1BQ9BZX4 212 aaPredicted RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 ROPN1Q9HAT0 212 aaPredicted RBP16.07■□□□□ 0.16
CHFR-204ENST00000443047 UBN1Q9NPG3 1134 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
CHFR-204ENST00000443047 NR3C1P04150 777 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 PTPN4P29074 926 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 KRT35Q92764 455 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 SERPINB12Q96P63 405 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 CYTH2Q99418 400 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 YIPF2Q9BWQ6 316 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 BZW2Q9Y6E2 419 aaKnown RBP16.06■□□□□ 0.16
CHFR-204ENST00000443047 RASA4BC9J798 803 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 RASA4O43374 803 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 THAP12O43422 761 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 DCTN3O75935 186 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 FAM13AO94988 1023 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 EYA4O95677 639 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 BAG2O95816 211 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
CHFR-204ENST00000443047 CHKAP35790 457 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 YARSP54577 528 aaKnown RBP16.06■□□□□ 0.16
CHFR-204ENST00000443047 CEP55Q53EZ4 464 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 WDR60Q8WVS4 1066 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 CADM1Q9BY67 442 aaKnown RBP16.06■□□□□ 0.16
CHFR-204ENST00000443047 WDR11Q9BZH6 1224 aa16.06■□□□□ 0.16
CHFR-204ENST00000443047 RANBP17Q9H2T7 1088 aaKnown RBP16.06■□□□□ 0.16
CHFR-204ENST00000443047 PIK3CDO00329 1044 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 PHF2O75151 1096 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 OATP04181 439 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 HNRNPCP07910 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHFR-204ENST00000443047 CYP3A4P08684 503 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 CETPP11597 493 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 OCRLQ01968 901 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 ACVR2BQ13705 512 aa16.05■□□□□ 0.16
CHFR-204ENST00000443047 TMED2Q15363 201 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms