RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 NCCRP1Q6ZVX7 275 aaPredicted RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 PDZD4Q76G19 769 aaPredicted RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 SLC13A5Q86YT5 568 aaPredicted RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 TSPAN14Q8NG11 270 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 AGR3Q8TD06 166 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 ASAP3Q8TDY4 903 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TUBGCP5Q96RT8 1024 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 WHRNQ9P202 907 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 SNX13Q9Y5W8 968 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 IVNS1ABPQ9Y6Y0 642 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 NCKAP5LQ9HCH0 1330 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 FAM25AB3EWG3 89 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 FAM25CB3EWG5 89 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 FAM25GB3EWG6 89 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 GNPATO15228 680 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 PDE8AO60658 829 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 CLASP2O75122 1294 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 ASMTLO95671 621 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 SNRPAP09012 282 aaKnown RBP10.83□□□□□ -0.68
LIN54-202ENST00000442461 ATP2B4P23634 1241 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 CCNFP41002 786 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 KRT6CP48668 564 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TUBA1BP68363 451 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TUBA1AQ71U36 451 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 FRMD5Q7Z6J6 570 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 C18orf8Q96DM3 657 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 CEP44Q9C0F1 390 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 TRIM39Q9HCM9 518 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 YEATS2Q9ULM3 1422 aa10.83□□□□□ -0.68
LIN54-202ENST00000442461 ASXL2Q76L83 1435 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 C6orf229H3BNL8 230 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 ITGA4P13612 1032 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 IL12RB1P42701 662 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 MAP3K10Q02779 954 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 PTK2BQ14289 1009 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 TMEM139Q8IV31 216 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 SH3GLB2Q9NR46 395 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 SEPT10Q9P0V9 454 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 RBMX2Q9Y388 322 aaKnown RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 PIK3R2O00459 728 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 THRAP10827 490 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 TFDP2Q14188 446 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 MEA1Q16626 185 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 BRDTQ58F21 947 aaPredicted RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 ZBTB41Q5SVQ8 909 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 FBXO31Q5XUX0 539 aaPredicted RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 ZFP1Q6P2D0 407 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 NET1Q7Z628 596 aaPredicted RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 IP6K1Q92551 441 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 AGPAT1Q99943 283 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 GIN1Q9NXP7 522 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 UVRAGQ9P2Y5 699 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 CDY2AQ9Y6F7 541 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 CDY1Q9Y6F8 540 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 KLHL41O60662 606 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 CASP5P51878 434 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 AQP5P55064 265 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 KNOP1Q1ED39 458 aaKnown RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 BNC2Q6ZN30 1099 aaPredicted RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 ZNF662Q6ZS27 426 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 DHDDSQ86SQ9 333 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 PYDC1Q8WXC3 89 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 RAD54LQ92698 747 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 TMEM206Q9H813 350 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 URB2Q14146 1524 aaKnown RBP10.82□□□□□ -0.68
LIN54-202ENST00000442461 UBE4BO95155 1302 aa10.82□□□□□ -0.68
LIN54-202ENST00000442461 RTN2O75298 545 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 COMTP21964 271 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 GUCY1A2P33402 732 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 MMP13P45452 471 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 XIAPP98170 497 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 FCHO2Q0JRZ9 810 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 SYCP2LQ5T4T6 812 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ISLR2Q6UXK2 745 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 DEFB107AQ8IZN7 70 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 POMGNT1Q8WZA1 660 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 GLMNQ92990 594 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ZNF496Q96IT1 587 aaPredicted RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 MAGED4Q96JG8 741 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 ZNF570Q96NI8 536 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 SENP7Q9BQF6 1050 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 STK33Q9BYT3 514 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 PUS3Q9BZE2 481 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 COPG1Q9Y678 874 aaKnown RBP10.81□□□□□ -0.68
LIN54-202ENST00000442461 MAP3K15Q6ZN16 1313 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 A6NJR5 290 aa10.81□□□□□ -0.68
LIN54-202ENST00000442461 DDX3XO00571 662 aaKnown RBP eCLIP10.81□□□□□ -0.681e-9■■■□□ 18.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms