RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 GCOM2Q9BZD3 368 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-210ENST00000441703 RSAD1Q9HA92 442 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 ZFP14Q9HCL3 533 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF334Q9HCZ1 680 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-210ENST00000441703 KCNH7Q9NS40 1196 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 RBM12Q9NTZ6 932 aaKnown RBP7.07□□□□□ -1.28
HDAC6-210ENST00000441703 FAM105AQ9NUU6 356 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 RBM28Q9NW13 759 aaKnown RBP7.07□□□□□ -1.28
HDAC6-210ENST00000441703 GDE1Q9NZC3 331 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 FNIP2Q9P278 1114 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 TCEAL9Q9UHQ7 104 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 FBXW11Q9UKB1 542 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 RAXQ9Y2V3 346 aa7.07□□□□□ -1.28
HDAC6-210ENST00000441703 DSPP15924 2871 aaKnown RBP7.07□□□□□ -1.28
HDAC6-210ENST00000441703 WDFY3Q8IZQ1 3526 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 NBEAQ8NFP9 2946 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 CCDC163A0A0D9SF12 145 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 SPDYE3A6NKU9 549 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MEIS3P2A8K0S8 358 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 H3BQF6 201 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 DDX39AO00148 427 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF263O14978 683 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 B4GALT3O60512 393 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ERLIN1O75477 346 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 URI1O94763 535 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 RPL17P18621 184 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 HOXA9P31269 272 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 GPC3P51654 580 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 KPNA1P52294 538 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 RESTQ13127 1097 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ITGB3BPQ13352 177 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 KARSQ15046 597 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 USP41Q3LFD5 358 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 PLK5Q496M5 336 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 DNAJC21Q5F1R6 531 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MIS18BP1Q6P0N0 1132 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 LILRA6Q6PI73 481 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 LRRC31Q6UY01 552 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 Q6ZS52 159 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 CYB5R4Q7L1T6 521 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 TADA2BQ86TJ2 420 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 CCDC60Q8IWA6 550 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 LRRC71Q8N4P6 559 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 LINC01465Q8N7H1 131 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MSANTD4Q8NCY6 345 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ANKRD20A12PQ8NF67 263 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ENGASEQ8NFI3 743 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 BICD2Q8TD16 824 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 RRP36Q96EU6 259 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ZC3H10Q96K80 434 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MBOAT7Q96N66 472 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MXRA8Q9BRK3 442 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 TRAIPQ9BWF2 469 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 COLEC11Q9BWP8 271 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 ACBD3Q9H3P7 528 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 CLMPQ9H6B4 373 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 PSTPIP2Q9H939 334 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MARCH5Q9NX47 278 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 SEC63Q9UGP8 760 aaKnown RBP7.06□□□□□ -1.28
HDAC6-210ENST00000441703 SLC8A2Q9UPR5 921 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 MRFAP1Q9Y605 127 aa7.06□□□□□ -1.28
HDAC6-210ENST00000441703 TDRD15B5MCY1 1934 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CNTNAP2Q9UHC6 1331 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 ERICH2A1L162 156 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 BCLAF3A2AJT9 711 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 FAM221BA6H8Z2 402 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CAPN9O14815 690 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CBFA2T2O43439 604 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CSDE1O75534 798 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 C1QL1O75973 258 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CCNE2O96020 404 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CAPNS1P04632 268 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 PSMC3P17980 439 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CALRP27797 417 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 SMARCA1P28370 1054 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 PPP2R3AQ06190 1150 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 NECTIN1Q15223 517 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 ZNF423Q2M1K9 1284 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 BEND6Q5SZJ8 279 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 SWSAP1Q6NVH7 229 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 FUT10Q6P4F1 479 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 ABHD15Q6UXT9 468 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CATSPER4Q7RTX7 472 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 YAF2Q8IY57 180 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 GPR65Q8IYL9 337 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 GPATCH11Q8N954 259 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 SLC7A14Q8TBB6 771 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 MDM1Q8TC05 714 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 DEPDC1BQ8WUY9 529 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 B3GALT6Q96L58 329 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 JAKMIP1Q96N16 626 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 INO80BQ9C086 356 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 C8orf33Q9H7E9 229 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 AGO4Q9HCK5 861 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 TRPV5Q9NQA5 729 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 CHST7Q9NS84 486 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 HCFC1R1Q9NWW0 138 aa7.05□□□□□ -1.28
HDAC6-210ENST00000441703 TFIP11Q9UBB9 837 aaKnown RBP7.05□□□□□ -1.28
HDAC6-210ENST00000441703 SUFUQ9UMX1 484 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms