RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SYT2Q8N9I0 419 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 SHCBP1Q8NEM2 672 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 RBM41Q96IZ5 413 aaKnown RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ARHGAP39Q9C0H5 1083 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CRB1P82279 1406 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 SLC9B1P1A6NJY1 282 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 OR5K4A6NMS3 321 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 L7N2F9 121 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 BCRP11274 1271 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 PPARGP37231 505 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CYP27C1Q4G0S4 372 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 RNASEH2BQ5TBB1 312 aaKnown RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ZNF704Q6ZNC4 412 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 STK32CQ86UX6 486 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 MFN1Q8IWA4 741 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 IFI44Q8TCB0 444 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 AK8Q96MA6 479 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CCDC177Q9NQR7 707 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ZMYM5Q9UJ78 669 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 HAT1O14929 419 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CYP27B1O15528 508 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 FGF18O76093 207 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ABCB4P21439 1286 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 GUCY1A2P33402 732 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 CTC1Q2NKJ3 1217 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 SLC10A6Q3KNW5 377 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ARL13BQ3SXY8 428 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 USP39Q53GS9 565 aaKnown RBP11.22□□□□□ -0.61
SYNE2-206ENST00000441438 FAM47CQ5HY64 1035 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 ISLR2Q6UXK2 745 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 KIF18AQ8NI77 898 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 KIAA1191Q96A73 305 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 VCPIP1Q96JH7 1222 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
SYNE2-206ENST00000441438 DCDC2CA8MYV0 355 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 TRDMT1O14717 391 aaKnown RBP11.21□□□□□ -0.61
SYNE2-206ENST00000441438 TAF5Q15542 800 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 NDUFAF5Q5TEU4 345 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 FAM83AQ86UY5 434 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 EFHBQ8N7U6 833 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 NIPA2Q8N8Q9 360 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 AGBL5Q8NDL9 886 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 TOR1AIP2Q8NFQ8 470 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 CCDC74BQ96LY2 380 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 GPRC5BQ9NZH0 403 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 ACEP12821 1306 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 TNS2Q63HR2 1409 aa11.21□□□□□ -0.61
SYNE2-206ENST00000441438 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.62
SYNE2-206ENST00000441438 PRPSAP2O60256 369 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 GREM1O60565 184 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 FAM153BP0C7A2 387 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 DSG3P32926 999 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 CARD18P57730 90 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 GALNT1Q10472 559 aaPredicted RBP11.21□□□□□ -0.62
SYNE2-206ENST00000441438 ZNF783Q6ZMS7 281 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 CPA6Q8N4T0 437 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 BCAS4Q8TDM0 211 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 CDCA5Q96FF9 252 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 FAM193BQ96PV7 902 aaPredicted RBP11.21□□□□□ -0.62
SYNE2-206ENST00000441438 PUS7LQ9H0K6 701 aaKnown RBP11.21□□□□□ -0.62
SYNE2-206ENST00000441438 LY9Q9HBG7 655 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 ZBTB40Q9NUA8 1239 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.62
SYNE2-206ENST00000441438 MYPNQ86TC9 1320 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 OR6C74A6NCV1 312 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ACOD1A6NK06 481 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 DDX5P17844 614 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CCR3P51677 355 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 SPAG1Q07617 926 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 IKBKEQ14164 716 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ZSCAN23Q3MJ62 389 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CHST15Q7LFX5 561 aaPredicted RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 UNC45BQ8IWX7 931 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ZSCAN1Q8NBB4 408 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 FAM216AQ8WUB2 273 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CITED4Q96RK1 184 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 IFNB1P01574 187 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 WEE2P0C1S8 567 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 MYL4P12829 197 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ACAT1P24752 427 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 ACADSBP45954 432 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 MAPKAPK2P49137 400 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 FNTAP49354 379 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 HADHQ16836 314 aaKnown RBP11.2□□□□□ -0.62
SYNE2-206ENST00000441438 BICDL1Q6ZP65 573 aa11.2□□□□□ -0.62
SYNE2-206ENST00000441438 NLRP9Q7RTR0 991 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms