RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 NFKBIBQ15653 356 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 USP41Q3LFD5 358 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 TIGD5Q53EQ6 642 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 GPR65Q8IYL9 337 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 LRRC52Q8N7C0 313 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 C1orf127Q8N9H9 656 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 PPP2R3CQ969Q6 453 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 MTMR12Q9C0I1 747 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
EBF3-203ENST00000440978 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
EBF3-203ENST00000440978 IRAK3Q9Y616 596 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 MTCH2Q9Y6C9 303 aa12.89□□□□□ -0.35
EBF3-203ENST00000440978 PTPRJQ12913 1337 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 F8W810 466 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
EBF3-203ENST00000440978 FSCN2O14926 492 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ITGB3P05106 788 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 CTSAP10619 480 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 FOSL2P15408 326 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 MARSP56192 900 aaKnown RBP12.88□□□□□ -0.35
EBF3-203ENST00000440978 ERVFC1P60507 584 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 RBP5P82980 135 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
EBF3-203ENST00000440978 PDXDC1Q6P996 788 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
EBF3-203ENST00000440978 TRAPPC11Q7Z392 1133 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 VPS52Q8N1B4 723 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 OR5B17Q8NGF7 314 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 HASPINQ8TF76 798 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ZNF560Q96MR9 790 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 GPR62Q9BZJ7 368 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ZBP1Q9H171 429 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ENTPD7Q9NQZ7 604 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
EBF3-203ENST00000440978 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
EBF3-203ENST00000440978 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 FSD2A1L4K1 749 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 M0QZQ0 153 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 SYN3O14994 580 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 URODP06132 367 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 IGFBP4P22692 258 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 POLR2BP30876 1174 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 GTF2H1P32780 548 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 GLUD2P49448 558 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
EBF3-203ENST00000440978 TAF6P49848 677 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 LILRA4P59901 499 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 DLG4P78352 724 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 DSG1Q02413 1049 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 CREMQ03060 361 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 TYRO3Q06418 890 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 SV2CQ496J9 727 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 CCDC40Q4G0X9 1142 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 FAM171A1Q5VUB5 890 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 LMBRD2Q68DH5 695 aaPredicted RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 CD300LGQ6UXG3 332 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 CXorf38Q8TB03 319 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 EEF2KMTQ96G04 330 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 SUSD3Q96L08 255 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 POP1Q99575 1024 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 TTPALQ9BTX7 342 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 SRRTQ9BXP5 876 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 NAT10Q9H0A0 1025 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 NSUN3Q9H649 340 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.87□□□□□ -0.35
EBF3-203ENST00000440978 MRPL17Q9NRX2 175 aaKnown RBP12.87□□□□□ -0.35
EBF3-203ENST00000440978 AGAP1Q9UPQ3 857 aa12.87□□□□□ -0.35
EBF3-203ENST00000440978 PPEF2O14830 753 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
EBF3-203ENST00000440978 C4BPAP04003 597 aaKnown RBP12.86□□□□□ -0.35
EBF3-203ENST00000440978 KRT19P08727 400 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 FGFR3P22607 806 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 ATICP31939 592 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 IRS1P35568 1242 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 BRCC3P46736 316 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 PTPN14Q15678 1187 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 ZACNQ401N2 412 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 C1orf220Q5T0J3 134 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 KIAA0319Q5VV43 1072 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 DSTYKQ6XUX3 929 aa12.86□□□□□ -0.35
EBF3-203ENST00000440978 C15orf39Q6ZRI6 1047 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms