RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 SIK3Q9Y2K2 1263 aa16.06■□□□□ 0.16
PLOD3-205ENST00000440925 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
PLOD3-205ENST00000440925 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-205ENST00000440925 PODXLO00592 558 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 NOL4O94818 638 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 ALDH2P05091 517 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 PON1P27169 355 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 RPL9P32969 192 aaKnown RBP16.05■□□□□ 0.16
PLOD3-205ENST00000440925 BRCC3P46736 316 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 AP3M2P53677 418 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 LILRA4P59901 499 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 RBP5P82980 135 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 NCOA4Q13772 614 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 UVSSAQ2YD98 709 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 TIGD5Q53EQ6 642 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 ABI1Q8IZP0 508 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 COLGALT1Q8NBJ5 622 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 ANKRD36BP1Q96IX9 119 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 XPO4Q9C0E2 1151 aaKnown RBP16.05■□□□□ 0.16
PLOD3-205ENST00000440925 RAB20Q9NX57 234 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 IFNKQ9P0W0 207 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 AJAP1Q9UKB5 411 aaPredicted RBP16.05■□□□□ 0.16
PLOD3-205ENST00000440925 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 NUB1Q9Y5A7 615 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 PCDHA11Q9Y5I1 949 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 CHD9Q3L8U1 2897 aa16.05■□□□□ 0.16
PLOD3-205ENST00000440925 SCN1AP35498 2009 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 I3L4J1 428 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 EPHB6O15197 1021 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 P4HA2O15460 535 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 KIF4AO95239 1232 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
PLOD3-205ENST00000440925 TNNC2P02585 160 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 CA3P07451 260 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 TMEM191BP0C7N4 346 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 AARSP49588 968 aaKnown RBP eCLIP16.04■□□□□ 0.16
PLOD3-205ENST00000440925 MXI1P50539 228 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 TAP1Q03518 808 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
PLOD3-205ENST00000440925 HSP90AA2PQ14568 343 aaPredicted RBP16.04■□□□□ 0.16
PLOD3-205ENST00000440925 SARM1Q6SZW1 724 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 ARHGEF19Q8IW93 802 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 FIBCD1Q8N539 461 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 C17orf80Q9BSJ5 609 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 GPR62Q9BZJ7 368 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 SDCBP2Q9H190 292 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
PLOD3-205ENST00000440925 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 POLIQ9UNA4 740 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 NME7Q9Y5B8 376 aa16.04■□□□□ 0.16
PLOD3-205ENST00000440925 STX10O60499 249 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 BMPR1AP36894 532 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 OR1G1P47890 313 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 UBASH3AP57075 661 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 GJB7Q6PEY0 223 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 RNF168Q8IYW5 571 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 HASPINQ8TF76 798 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 KAT5Q92993 513 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 HPDLQ96IR7 371 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 ERGIC2Q96RQ1 377 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 INTS2Q9H0H0 1204 aaKnown RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 NKX2-4Q9H2Z4 354 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 VRTNQ9H8Y1 702 aa16.03■□□□□ 0.16
PLOD3-205ENST00000440925 PRG3Q9Y2Y8 225 aaPredicted RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 TDRD15B5MCY1 1934 aaKnown RBP16.03■□□□□ 0.16
PLOD3-205ENST00000440925 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.16
PLOD3-205ENST00000440925 EPOPA6NHQ4 379 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 TMEM189-UBE2V1I3L0A0 370 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 SOX1O00570 391 aaPredicted RBP16.02■□□□□ 0.16
PLOD3-205ENST00000440925 STAU1O95793 577 aaKnown RBP16.02■□□□□ 0.16
PLOD3-205ENST00000440925 SERPINC1P01008 464 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 KRT19P08727 400 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 DNAJB1P25685 340 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 MYL7Q01449 175 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 UBXN1Q04323 297 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 LRMPQ12912 555 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 BIRC3Q13489 604 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 CAMK1Q14012 370 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 SGSM1Q2NKQ1 1148 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 LRRC52Q8N7C0 313 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 IGSF21Q96ID5 467 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 KREMEN1Q96MU8 473 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 UROC1Q96N76 676 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 FAM193BQ96PV7 902 aaPredicted RBP16.02■□□□□ 0.16
PLOD3-205ENST00000440925 GDAP2Q9NXN4 497 aa16.02■□□□□ 0.16
PLOD3-205ENST00000440925 GBF1Q92538 1859 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms