RNA–Protein interactions for RNA: ENST00000439482.5

TTC39A-211, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 978 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-211ENST00000439482 CD4P01730 458 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 PNMA6AP0CW24 399 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 ATF7P17544 494 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 ACO1P21399 889 aaKnown RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 NAP1L1P55209 391 aaKnown RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 FAM26DQ5JW98 314 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 PAPD7Q5XG87 772 aaKnown RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 LHX8Q68G74 356 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 RHOT2Q8IXI1 618 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 SYCE1Q8N0S2 351 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 TRIM11Q96F44 468 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 SNX27Q96L92 541 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 DNAI2Q9GZS0 605 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 XYLT2Q9H1B5 865 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 SEPT11Q9NVA2 429 aaKnown RBP12.18□□□□□ -0.46
TTC39A-211ENST00000439482 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 TRIM10Q9UDY6 481 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 CDC23Q9UJX2 597 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 PCDHGC5Q9Y5F6 944 aa12.18□□□□□ -0.46
TTC39A-211ENST00000439482 A0A0U1RQG5 324 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 NFICP08651 508 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 KRT19P08727 400 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 MYBL1P10243 752 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 SKIP12755 728 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 KCNE1P15382 129 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 CYP3A5P20815 502 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 FGFR4P22455 802 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 RAB27AP51159 221 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 GALCP54803 685 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 ALKAL1Q6UXT8 129 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 TMEM192Q8IY95 271 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 LRRC52Q8N7C0 313 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 UBR7Q8N806 425 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 CEP112Q8N8E3 955 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 C1orf127Q8N9H9 656 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 SLC43A3Q8NBI5 491 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 RBBP8NLQ8NC74 664 aaPredicted RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 TMEM40Q8WWA1 233 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 RFFLQ8WZ73 363 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 UBQLN1Q9UMX0 589 aaKnown RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 PHF24Q9UPV7 400 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 NOC2LQ9Y3T9 749 aaKnown RBP12.17□□□□□ -0.46
TTC39A-211ENST00000439482 TRIM17Q9Y577 477 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 MRFAP1Q9Y605 127 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 DUSP10Q9Y6W6 482 aa12.17□□□□□ -0.46
TTC39A-211ENST00000439482 NCANO14594 1321 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 GRIN2DO15399 1336 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 LSM8O95777 96 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 ABL1P00519 1130 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 FTLP02792 175 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 PAEPP09466 180 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 ZSCAN20P17040 1043 aaPredicted RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 CHRNB2P17787 502 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 THPOP40225 353 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 PNPLA4P41247 253 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 ZNF132P52740 706 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 HADHBP55084 474 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 GPC5P78333 572 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 FMO1Q01740 532 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 MGAT3Q09327 533 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 UBXN11Q5T124 520 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 SPOPLQ6IQ16 392 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 ACAD10Q6JQN1 1059 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 MNS1Q8NEH6 495 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 SLC20A1Q8WUM9 679 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 DDX1Q92499 740 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 HPDLQ96IR7 371 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 BCO2Q9BYV7 579 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 PDCL3Q9H2J4 239 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.16□□□□□ -0.46
TTC39A-211ENST00000439482 CISHQ9NSE2 258 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 SNTG2Q9NY99 539 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 SIX4Q9UIU6 781 aa12.16□□□□□ -0.46
TTC39A-211ENST00000439482 KIAA1257Q9ULG3 409 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms