RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 SLC6A18Q96N87 628 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 FAM193BQ96PV7 902 aaPredicted RBP8.3□□□□□ -1.08
HCG20-208ENST00000439406 INSM2Q96T92 566 aaPredicted RBP8.3□□□□□ -1.08
HCG20-208ENST00000439406 C17orf80Q9BSJ5 609 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 GBP3Q9H0R5 595 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
HCG20-208ENST00000439406 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 RSAD1Q9HA92 442 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 MTMR4Q9NYA4 1195 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 MUTYHQ9UIF7 546 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
HCG20-208ENST00000439406 ITIH6Q6UXX5 1313 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 SIP14410 1827 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 KLHL33A6NCF5 533 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 A6NCN8 305 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 A6NNZ2 444 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 CHURC1-FNTBB4DL54 471 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 GOLIM4O00461 696 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 MBTPS2O43462 519 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 AMHP03971 560 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 GSTP1P09211 210 aaKnown RBP8.29□□□□□ -1.08
HCG20-208ENST00000439406 CKBP12277 381 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 ALAS1P13196 640 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 NAT1P18440 290 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 PTGS1P23219 599 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 LTBRP36941 435 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 GGCXP38435 758 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 AP3B2Q13367 1082 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 GPM6BQ13491 265 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 ZSCAN23Q3MJ62 389 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 TCEAL5Q5H9L2 206 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 SLFN13Q68D06 897 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 ZSCAN25Q6NSZ9 544 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 C16orf54Q6UWD8 224 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 C1orf122Q6ZSJ8 110 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 EP400NLQ6ZTU2 488 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 PRICKLE2Q7Z3G6 844 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 TMCO2Q7Z6W1 182 aaPredicted RBP8.29□□□□□ -1.08
HCG20-208ENST00000439406 SPNS2Q8IVW8 549 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 SLFN12Q8IYM2 578 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 SCFD2Q8WU76 684 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 ATOH1Q92858 354 aaPredicted RBP8.29□□□□□ -1.08
HCG20-208ENST00000439406 MRGPRX2Q96LB1 330 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
HCG20-208ENST00000439406 KLHL25Q9H0H3 589 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 MYLK2Q9H1R3 596 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 CRISPLD1Q9H336 500 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 THG1LQ9NWX6 298 aaKnown RBP8.29□□□□□ -1.08
HCG20-208ENST00000439406 CLDND1Q9NY35 253 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 RRN3Q9NYV6 651 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 TPCN1Q9ULQ1 816 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
HCG20-208ENST00000439406 COL4A4P53420 1690 aaPredicted RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 A0A1B0GVC2 190 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 VGLL3A8MV65 326 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 K7ENM7 598 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 STXBP3O00186 592 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 WNT7AO00755 349 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 AQP7O14520 342 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 TBX1O43435 398 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA12O60330 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PPM1BO75688 479 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 HRGP04196 525 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 RB1P06400 928 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 CASTP20810 708 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 SLC1A4P43007 532 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 WDR4P57081 412 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 ZXDAP98168 799 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 SFSWAPQ12872 951 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 INPP5AQ14642 412 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PPP2R5BQ15173 497 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 INTS11Q5TA45 600 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 RCSD1Q6JBY9 416 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 LRSAM1Q6UWE0 723 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 DHX32Q7L7V1 743 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 TMEM192Q8IY95 271 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 FAM156AQ8NDB6 213 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 TOP1MTQ969P6 601 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 GMCL1Q96IK5 515 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 TBCBQ99426 244 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 LMAN2LQ9H0V9 348 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 AGO4Q9HCK5 861 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 PAG1Q9NWQ8 432 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 ADAM30Q9UKF2 790 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA9Q9Y5G4 932 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA8Q9Y5G5 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA7Q9Y5G6 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA6Q9Y5G7 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA3Q9Y5H0 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 PCDHGA2Q9Y5H1 932 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 BAZ2AQ9UIF9 1905 aaKnown RBP8.28□□□□□ -1.08
HCG20-208ENST00000439406 CACNA1HO95180 2353 aa8.28□□□□□ -1.08
HCG20-208ENST00000439406 RIF1Q5UIP0 2472 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms